Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.43■□□□□ 0.7
POLR3DP05423 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.43■□□□□ 0.7
POLR3DP05423 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.43■□□□□ 0.7
POLR3DP05423 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.43■□□□□ 0.7
POLR3DP05423 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR3DP05423 RN7SL828P-201ENST00000607615 303 ntBASIC19.43■□□□□ 0.7
POLR3DP05423 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
POLR3DP05423 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR3DP05423 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR3DP05423 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR3DP05423 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR3DP05423 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR3DP05423 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR3DP05423 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
POLR3DP05423 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR3DP05423 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR3DP05423 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.42■□□□□ 0.7
POLR3DP05423 LINC01144-201ENST00000626198 1710 ntBASIC19.42■□□□□ 0.7
POLR3DP05423 AC005622.1-201ENST00000636801 1703 ntBASIC19.42■□□□□ 0.7
POLR3DP05423 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR3DP05423 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
POLR3DP05423 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR3DP05423 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR3DP05423 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR3DP05423 AC006449.5-201ENST00000610658 2098 ntBASIC19.42■□□□□ 0.7
POLR3DP05423 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
POLR3DP05423 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR3DP05423 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR3DP05423 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR3DP05423 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR3DP05423 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
POLR3DP05423 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR3DP05423 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR3DP05423 TSPY16P-201ENST00000449843 468 ntBASIC19.42■□□□□ 0.7
POLR3DP05423 UGT1A2P-201ENST00000454886 866 ntBASIC19.42■□□□□ 0.7
POLR3DP05423 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
POLR3DP05423 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR3DP05423 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
POLR3DP05423 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR3DP05423 AL590560.3-201ENST00000623350 461 ntBASIC19.42■□□□□ 0.7
POLR3DP05423 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR3DP05423 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR3DP05423 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR3DP05423 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.42■□□□□ 0.7
POLR3DP05423 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.42■□□□□ 0.7
POLR3DP05423 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR3DP05423 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR3DP05423 AC005052.1-201ENST00000625181 2492 ntBASIC19.42■□□□□ 0.7
POLR3DP05423 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR3DP05423 AC100757.3-201ENST00000622361 1406 ntBASIC19.42■□□□□ 0.7
POLR3DP05423 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR3DP05423 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR3DP05423 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR3DP05423 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR3DP05423 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR3DP05423 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
POLR3DP05423 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.41■□□□□ 0.7
POLR3DP05423 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
POLR3DP05423 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR3DP05423 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR3DP05423 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.41■□□□□ 0.7
POLR3DP05423 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR3DP05423 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.41■□□□□ 0.7
POLR3DP05423 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
POLR3DP05423 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR3DP05423 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.41■□□□□ 0.7
POLR3DP05423 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.41■□□□□ 0.7
POLR3DP05423 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR3DP05423 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.41■□□□□ 0.7
POLR3DP05423 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.41■□□□□ 0.7
POLR3DP05423 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.41■□□□□ 0.7
POLR3DP05423 AL589739.1-201ENST00000607720 493 ntBASIC19.41■□□□□ 0.7
POLR3DP05423 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR3DP05423 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR3DP05423 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR3DP05423 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
POLR3DP05423 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
POLR3DP05423 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR3DP05423 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR3DP05423 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
POLR3DP05423 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR3DP05423 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.41■□□□□ 0.7
POLR3DP05423 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
POLR3DP05423 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLR3DP05423 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
POLR3DP05423 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR3DP05423 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR3DP05423 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
POLR3DP05423 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR3DP05423 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
POLR3DP05423 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.4■□□□□ 0.7
POLR3DP05423 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
POLR3DP05423 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR3DP05423 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR3DP05423 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR3DP05423 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR3DP05423 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
POLR3DP05423 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.4■□□□□ 0.7
POLR3DP05423 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLR3DP05423 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms