Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HMGN1P05114 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGN1P05114 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGN1P05114 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGN1P05114 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
HMGN1P05114 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HMGN1P05114 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
HMGN1P05114 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HMGN1P05114 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGN1P05114 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.8□□□□□ -0.04
HMGN1P05114 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGN1P05114 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.8□□□□□ -0.04
HMGN1P05114 FAM210CP-201ENST00000445714 574 ntBASIC14.8□□□□□ -0.04
HMGN1P05114 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
HMGN1P05114 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HMGN1P05114 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.8□□□□□ -0.04
HMGN1P05114 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.8□□□□□ -0.04
HMGN1P05114 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.8□□□□□ -0.04
HMGN1P05114 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.8□□□□□ -0.04
HMGN1P05114 AC107918.4-202ENST00000641623 219 ntBASIC14.8□□□□□ -0.04
HMGN1P05114 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.8□□□□□ -0.04
HMGN1P05114 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
HMGN1P05114 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 AC006058.4-201ENST00000624016 1670 ntBASIC14.8□□□□□ -0.04
HMGN1P05114 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HMGN1P05114 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HMGN1P05114 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HMGN1P05114 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
HMGN1P05114 AC073347.1-201ENST00000421633 2643 ntBASIC14.79□□□□□ -0.04
HMGN1P05114 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
HMGN1P05114 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.79□□□□□ -0.04
HMGN1P05114 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGN1P05114 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGN1P05114 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
HMGN1P05114 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGN1P05114 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGN1P05114 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HMGN1P05114 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGN1P05114 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGN1P05114 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGN1P05114 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGN1P05114 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGN1P05114 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMGN1P05114 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HMGN1P05114 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
HMGN1P05114 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
HMGN1P05114 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
HMGN1P05114 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGN1P05114 KRT18P31-201ENST00000506277 1292 ntBASIC14.79□□□□□ -0.04
HMGN1P05114 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
HMGN1P05114 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.79□□□□□ -0.04
HMGN1P05114 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.79□□□□□ -0.04
HMGN1P05114 AC025062.2-201ENST00000605477 670 ntBASIC14.79□□□□□ -0.04
HMGN1P05114 AC021097.1-201ENST00000607902 574 ntBASIC14.79□□□□□ -0.04
HMGN1P05114 AC092919.2-201ENST00000623631 1645 ntBASIC14.79□□□□□ -0.04
HMGN1P05114 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
HMGN1P05114 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMGN1P05114 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HMGN1P05114 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.79□□□□□ -0.04
HMGN1P05114 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.79□□□□□ -0.04
HMGN1P05114 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.79□□□□□ -0.04
HMGN1P05114 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
HMGN1P05114 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HMGN1P05114 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGN1P05114 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMGN1P05114 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.78□□□□□ -0.04
HMGN1P05114 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HMGN1P05114 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
HMGN1P05114 PCDHA3-202ENST00000532566 4594 ntBASIC14.78□□□□□ -0.04
HMGN1P05114 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.78□□□□□ -0.04
HMGN1P05114 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMGN1P05114 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms