Protein–RNA interactions for Protein: P04259

KRT6B, Keratin, type II cytoskeletal 6B, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6BP04259 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6BP04259 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6BP04259 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6BP04259 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6BP04259 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6BP04259 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRT6BP04259 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRT6BP04259 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRT6BP04259 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
KRT6BP04259 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
KRT6BP04259 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.83■□□□□ 0.13
KRT6BP04259 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
KRT6BP04259 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRT6BP04259 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRT6BP04259 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.83■□□□□ 0.13
KRT6BP04259 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
KRT6BP04259 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRT6BP04259 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6BP04259 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.83■□□□□ 0.12
KRT6BP04259 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6BP04259 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
KRT6BP04259 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6BP04259 PAUPAR-201ENST00000630360 2965 ntBASIC15.83■□□□□ 0.12
KRT6BP04259 LINC00554-201ENST00000564841 3011 ntBASIC15.83■□□□□ 0.12
KRT6BP04259 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.83■□□□□ 0.12
KRT6BP04259 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
KRT6BP04259 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
KRT6BP04259 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6BP04259 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
KRT6BP04259 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6BP04259 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.83■□□□□ 0.12
KRT6BP04259 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
KRT6BP04259 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6BP04259 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.83■□□□□ 0.12
KRT6BP04259 RHOQP3-201ENST00000437982 621 ntBASIC15.83■□□□□ 0.12
KRT6BP04259 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
KRT6BP04259 AC079776.4-201ENST00000511039 504 ntBASIC15.83■□□□□ 0.12
KRT6BP04259 RNA5SP419-201ENST00000515908 135 ntBASIC15.83■□□□□ 0.12
KRT6BP04259 AC109635.5-201ENST00000533593 962 ntBASIC15.83■□□□□ 0.12
KRT6BP04259 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.83■□□□□ 0.12
KRT6BP04259 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.83■□□□□ 0.12
KRT6BP04259 AC023141.13-201ENST00000604991 943 ntBASIC15.83■□□□□ 0.12
KRT6BP04259 AC010507.1-201ENST00000633895 436 ntBASIC15.83■□□□□ 0.12
KRT6BP04259 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6BP04259 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
KRT6BP04259 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6BP04259 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6BP04259 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
KRT6BP04259 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6BP04259 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6BP04259 TCAF2P1-201ENST00000291129 2421 ntBASIC15.83■□□□□ 0.12
KRT6BP04259 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.83■□□□□ 0.12
KRT6BP04259 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6BP04259 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6BP04259 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.82■□□□□ 0.12
KRT6BP04259 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6BP04259 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6BP04259 LINC02447-202ENST00000501888 2146 ntBASIC15.82■□□□□ 0.12
KRT6BP04259 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
KRT6BP04259 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6BP04259 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6BP04259 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.82■□□□□ 0.12
KRT6BP04259 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6BP04259 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6BP04259 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
KRT6BP04259 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6BP04259 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.82■□□□□ 0.12
KRT6BP04259 KRT18P34-201ENST00000488218 1270 ntBASIC15.82■□□□□ 0.12
KRT6BP04259 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.82■□□□□ 0.12
KRT6BP04259 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.82■□□□□ 0.12
KRT6BP04259 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.82■□□□□ 0.12
KRT6BP04259 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.82■□□□□ 0.12
KRT6BP04259 AL009183.1-201ENST00000603760 355 ntBASIC15.82■□□□□ 0.12
KRT6BP04259 Z83851.2-201ENST00000609564 659 ntBASIC15.82■□□□□ 0.12
KRT6BP04259 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6BP04259 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6BP04259 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6BP04259 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6BP04259 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6BP04259 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6BP04259 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6BP04259 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6BP04259 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6BP04259 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.82■□□□□ 0.12
KRT6BP04259 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.82■□□□□ 0.12
KRT6BP04259 CDC14C-201ENST00000428251 1719 ntBASIC15.82■□□□□ 0.12
KRT6BP04259 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.82■□□□□ 0.12
KRT6BP04259 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.82■□□□□ 0.12
KRT6BP04259 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6BP04259 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6BP04259 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6BP04259 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6BP04259 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6BP04259 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6BP04259 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6BP04259 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6BP04259 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6BP04259 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6BP04259 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6BP04259 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms