Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.93□□□□□ -0.34
IFNA1P01562 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.93□□□□□ -0.34
IFNA1P01562 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
IFNA1P01562 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.93□□□□□ -0.34
IFNA1P01562 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.93□□□□□ -0.34
IFNA1P01562 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.93□□□□□ -0.34
IFNA1P01562 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.93□□□□□ -0.34
IFNA1P01562 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
IFNA1P01562 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
IFNA1P01562 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
IFNA1P01562 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC12.93□□□□□ -0.34
IFNA1P01562 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC12.93□□□□□ -0.34
IFNA1P01562 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC12.93□□□□□ -0.34
IFNA1P01562 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC12.93□□□□□ -0.34
IFNA1P01562 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.93□□□□□ -0.34
IFNA1P01562 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC12.93□□□□□ -0.34
IFNA1P01562 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
IFNA1P01562 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.93□□□□□ -0.34
IFNA1P01562 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
IFNA1P01562 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
IFNA1P01562 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.93□□□□□ -0.34
IFNA1P01562 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.93□□□□□ -0.34
IFNA1P01562 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 LINC00528-201ENST00000600723 2160 ntBASIC12.93□□□□□ -0.34
IFNA1P01562 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IFNA1P01562 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
IFNA1P01562 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
IFNA1P01562 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
IFNA1P01562 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.92□□□□□ -0.34
IFNA1P01562 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.92□□□□□ -0.34
IFNA1P01562 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
IFNA1P01562 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
IFNA1P01562 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
IFNA1P01562 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
IFNA1P01562 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.92□□□□□ -0.34
IFNA1P01562 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC12.92□□□□□ -0.34
IFNA1P01562 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC12.92□□□□□ -0.34
IFNA1P01562 ADM-205ENST00000528544 586 ntTSL 2 BASIC12.92□□□□□ -0.34
IFNA1P01562 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.92□□□□□ -0.34
IFNA1P01562 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.92□□□□□ -0.34
IFNA1P01562 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC12.92□□□□□ -0.34
IFNA1P01562 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC12.92□□□□□ -0.34
IFNA1P01562 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.92□□□□□ -0.34
IFNA1P01562 SPIB-206ENST00000596074 847 ntTSL 2 BASIC12.92□□□□□ -0.34
IFNA1P01562 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
IFNA1P01562 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
IFNA1P01562 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.92□□□□□ -0.34
IFNA1P01562 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms