Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTN3O95197 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTN3O95197 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RTN3O95197 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTN3O95197 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RTN3O95197 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTN3O95197 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTN3O95197 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTN3O95197 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTN3O95197 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.18■□□□□ 0.34
RTN3O95197 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTN3O95197 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTN3O95197 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTN3O95197 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTN3O95197 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTN3O95197 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.17■□□□□ 0.34
RTN3O95197 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTN3O95197 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.17■□□□□ 0.34
RTN3O95197 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
RTN3O95197 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
RTN3O95197 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTN3O95197 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RTN3O95197 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTN3O95197 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.17■□□□□ 0.34
RTN3O95197 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.17■□□□□ 0.34
RTN3O95197 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.17■□□□□ 0.34
RTN3O95197 RNA5SP421-201ENST00000516864 134 ntBASIC17.17■□□□□ 0.34
RTN3O95197 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.17■□□□□ 0.34
RTN3O95197 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTN3O95197 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTN3O95197 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.17■□□□□ 0.34
RTN3O95197 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.17■□□□□ 0.34
RTN3O95197 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTN3O95197 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTN3O95197 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTN3O95197 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTN3O95197 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTN3O95197 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.17■□□□□ 0.34
RTN3O95197 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RTN3O95197 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RTN3O95197 U82695.1-201ENST00000635752 1889 ntBASIC17.16■□□□□ 0.34
RTN3O95197 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN3O95197 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN3O95197 AC005622.1-201ENST00000636801 1703 ntBASIC17.16■□□□□ 0.34
RTN3O95197 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.16■□□□□ 0.34
RTN3O95197 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTN3O95197 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.16■□□□□ 0.34
RTN3O95197 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RTN3O95197 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.16■□□□□ 0.34
RTN3O95197 TREML5P-201ENST00000421694 576 ntBASIC17.16■□□□□ 0.34
RTN3O95197 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
RTN3O95197 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN3O95197 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.16■□□□□ 0.34
RTN3O95197 POU5F1P6-201ENST00000466990 990 ntBASIC17.16■□□□□ 0.34
RTN3O95197 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.16■□□□□ 0.34
RTN3O95197 AC093214.1-201ENST00000511688 1107 ntBASIC17.16■□□□□ 0.34
RTN3O95197 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.16■□□□□ 0.34
RTN3O95197 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTN3O95197 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.16■□□□□ 0.34
RTN3O95197 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RTN3O95197 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.16■□□□□ 0.34
RTN3O95197 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.16■□□□□ 0.34
RTN3O95197 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
RTN3O95197 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN3O95197 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN3O95197 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
RTN3O95197 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RTN3O95197 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
RTN3O95197 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN3O95197 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN3O95197 AC106886.4-201ENST00000623557 2502 ntBASIC17.16■□□□□ 0.34
RTN3O95197 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTN3O95197 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN3O95197 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN3O95197 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN3O95197 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN3O95197 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN3O95197 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN3O95197 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN3O95197 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.16■□□□□ 0.34
RTN3O95197 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
RTN3O95197 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTN3O95197 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.15■□□□□ 0.34
RTN3O95197 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.15■□□□□ 0.34
RTN3O95197 FO538757.1-201ENST00000623083 1397 ntBASIC17.15■□□□□ 0.34
RTN3O95197 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTN3O95197 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RTN3O95197 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTN3O95197 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTN3O95197 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.15■□□□□ 0.34
RTN3O95197 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTN3O95197 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTN3O95197 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTN3O95197 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
RTN3O95197 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.15■□□□□ 0.34
RTN3O95197 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTN3O95197 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTN3O95197 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RTN3O95197 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.15■□□□□ 0.34
RTN3O95197 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms