Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
GPC4O75487 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
GPC4O75487 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.39■□□□□ 0.21
GPC4O75487 RNU1-129P-201ENST00000384064 167 ntBASIC16.39■□□□□ 0.21
GPC4O75487 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.39■□□□□ 0.21
GPC4O75487 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.39■□□□□ 0.21
GPC4O75487 PGAM5P1-201ENST00000518923 814 ntBASIC16.39■□□□□ 0.21
GPC4O75487 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.39■□□□□ 0.21
GPC4O75487 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
GPC4O75487 MIR3909-201ENST00000579518 119 ntBASIC16.39■□□□□ 0.21
GPC4O75487 U1.21-201ENST00000580816 167 ntBASIC16.39■□□□□ 0.21
GPC4O75487 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.39■□□□□ 0.21
GPC4O75487 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
GPC4O75487 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.39■□□□□ 0.21
GPC4O75487 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
GPC4O75487 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
GPC4O75487 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.39■□□□□ 0.21
GPC4O75487 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
GPC4O75487 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.39■□□□□ 0.21
GPC4O75487 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GPC4O75487 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.38■□□□□ 0.21
GPC4O75487 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
GPC4O75487 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
GPC4O75487 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.38■□□□□ 0.21
GPC4O75487 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.38■□□□□ 0.21
GPC4O75487 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.38■□□□□ 0.21
GPC4O75487 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.38■□□□□ 0.21
GPC4O75487 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.38■□□□□ 0.21
GPC4O75487 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.38■□□□□ 0.21
GPC4O75487 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.38■□□□□ 0.21
GPC4O75487 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.38■□□□□ 0.21
GPC4O75487 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.38■□□□□ 0.21
GPC4O75487 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.38■□□□□ 0.21
GPC4O75487 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.38■□□□□ 0.21
GPC4O75487 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.38■□□□□ 0.21
GPC4O75487 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.38■□□□□ 0.21
GPC4O75487 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 PDPK2P-202ENST00000562415 1191 ntBASIC16.38■□□□□ 0.21
GPC4O75487 AL513190.1-201ENST00000621254 727 ntBASIC16.38■□□□□ 0.21
GPC4O75487 AC092865.6-201ENST00000642101 219 ntBASIC16.38■□□□□ 0.21
GPC4O75487 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
GPC4O75487 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 AL365209.1-201ENST00000624418 6473 ntBASIC16.38■□□□□ 0.21
GPC4O75487 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
GPC4O75487 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
GPC4O75487 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.38■□□□□ 0.21
GPC4O75487 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
GPC4O75487 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 MTHFR-217ENST00000641820 1569 ntBASIC16.38■□□□□ 0.21
GPC4O75487 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
GPC4O75487 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.38■□□□□ 0.21
GPC4O75487 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GPC4O75487 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
GPC4O75487 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
GPC4O75487 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
GPC4O75487 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.37■□□□□ 0.21
GPC4O75487 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
GPC4O75487 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.37■□□□□ 0.21
GPC4O75487 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GPC4O75487 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.37■□□□□ 0.21
GPC4O75487 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms