Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.6□□□□□ -0.07
ZIC3O60481 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.6□□□□□ -0.07
ZIC3O60481 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC3O60481 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.6□□□□□ -0.07
ZIC3O60481 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
ZIC3O60481 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.6□□□□□ -0.07
ZIC3O60481 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC3O60481 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC3O60481 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ZIC3O60481 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC3O60481 PCDHB19P-201ENST00000570871 2371 ntBASIC14.6□□□□□ -0.07
ZIC3O60481 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC3O60481 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ZIC3O60481 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC3O60481 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
ZIC3O60481 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
ZIC3O60481 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC3O60481 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.59□□□□□ -0.07
ZIC3O60481 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.59□□□□□ -0.07
ZIC3O60481 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ZIC3O60481 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.59□□□□□ -0.07
ZIC3O60481 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.59□□□□□ -0.07
ZIC3O60481 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ZIC3O60481 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.59□□□□□ -0.07
ZIC3O60481 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.59□□□□□ -0.07
ZIC3O60481 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.59□□□□□ -0.07
ZIC3O60481 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 AC241585.1-201ENST00000433527 519 ntBASIC14.59□□□□□ -0.07
ZIC3O60481 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.59□□□□□ -0.07
ZIC3O60481 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.59□□□□□ -0.07
ZIC3O60481 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.59□□□□□ -0.07
ZIC3O60481 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.59□□□□□ -0.07
ZIC3O60481 AC093214.1-201ENST00000511688 1107 ntBASIC14.59□□□□□ -0.07
ZIC3O60481 RNA5SP421-201ENST00000516864 134 ntBASIC14.59□□□□□ -0.07
ZIC3O60481 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.59□□□□□ -0.07
ZIC3O60481 IGHV3-42-201ENST00000520410 361 ntBASIC14.59□□□□□ -0.07
ZIC3O60481 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.59□□□□□ -0.07
ZIC3O60481 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.59□□□□□ -0.07
ZIC3O60481 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.59□□□□□ -0.07
ZIC3O60481 TEX28P1-201ENST00000613479 1221 ntBASIC14.59□□□□□ -0.07
ZIC3O60481 TEX28P2-201ENST00000617764 1221 ntBASIC14.59□□□□□ -0.07
ZIC3O60481 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.59□□□□□ -0.07
ZIC3O60481 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
ZIC3O60481 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.59□□□□□ -0.07
ZIC3O60481 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.59□□□□□ -0.07
ZIC3O60481 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.59□□□□□ -0.07
ZIC3O60481 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.59□□□□□ -0.07
ZIC3O60481 KRT8P12-202ENST00000472924 1397 ntBASIC14.59□□□□□ -0.07
ZIC3O60481 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ZIC3O60481 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
ZIC3O60481 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.59□□□□□ -0.07
ZIC3O60481 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC3O60481 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.07
ZIC3O60481 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ZIC3O60481 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.58□□□□□ -0.07
ZIC3O60481 AC100757.3-201ENST00000622361 1406 ntBASIC14.58□□□□□ -0.07
ZIC3O60481 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.58□□□□□ -0.07
ZIC3O60481 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ZIC3O60481 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC3O60481 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.58□□□□□ -0.08
ZIC3O60481 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
ZIC3O60481 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.58□□□□□ -0.08
ZIC3O60481 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC3O60481 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC3O60481 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC3O60481 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC3O60481 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.58□□□□□ -0.08
ZIC3O60481 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.58□□□□□ -0.08
ZIC3O60481 AL080243.2-201ENST00000418783 582 ntBASIC14.58□□□□□ -0.08
ZIC3O60481 TSSK5P-201ENST00000423978 907 ntBASIC14.58□□□□□ -0.08
ZIC3O60481 BASP1P1-201ENST00000430708 665 ntBASIC14.58□□□□□ -0.08
ZIC3O60481 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.58□□□□□ -0.08
ZIC3O60481 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.58□□□□□ -0.08
ZIC3O60481 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms