Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 MIR770-201ENST00000390219 98 ntBASIC18.29■□□□□ 0.52
CHMP2AO43633 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2AO43633 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.29■□□□□ 0.52
CHMP2AO43633 AC140878.1-201ENST00000565277 250 ntBASIC18.29■□□□□ 0.52
CHMP2AO43633 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP2AO43633 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2AO43633 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.29■□□□□ 0.52
CHMP2AO43633 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2AO43633 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.29■□□□□ 0.52
CHMP2AO43633 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2AO43633 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2AO43633 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2AO43633 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2AO43633 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP2AO43633 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2AO43633 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2AO43633 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2AO43633 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CHMP2AO43633 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CHMP2AO43633 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2AO43633 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMP2AO43633 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMP2AO43633 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2AO43633 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP2AO43633 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMP2AO43633 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2AO43633 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2AO43633 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP2AO43633 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP2AO43633 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2AO43633 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CHMP2AO43633 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CHMP2AO43633 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2AO43633 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.28■□□□□ 0.52
CHMP2AO43633 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.28■□□□□ 0.52
CHMP2AO43633 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CHMP2AO43633 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.28■□□□□ 0.52
CHMP2AO43633 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CHMP2AO43633 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.28■□□□□ 0.52
CHMP2AO43633 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.28■□□□□ 0.52
CHMP2AO43633 AC093214.1-201ENST00000511688 1107 ntBASIC18.28■□□□□ 0.52
CHMP2AO43633 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2AO43633 AC069120.2-201ENST00000524091 540 ntBASIC18.28■□□□□ 0.52
CHMP2AO43633 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP2AO43633 BANF1P1-201ENST00000553684 263 ntBASIC18.28■□□□□ 0.52
CHMP2AO43633 AC105021.1-202ENST00000570572 669 ntBASIC18.28■□□□□ 0.52
CHMP2AO43633 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.28■□□□□ 0.52
CHMP2AO43633 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP2AO43633 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2AO43633 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2AO43633 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CHMP2AO43633 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
CHMP2AO43633 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2AO43633 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2AO43633 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2AO43633 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2AO43633 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP2AO43633 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2AO43633 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CHMP2AO43633 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CHMP2AO43633 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CHMP2AO43633 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CHMP2AO43633 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2AO43633 AL592424.1-201ENST00000563624 1536 ntBASIC18.28■□□□□ 0.52
CHMP2AO43633 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP2AO43633 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CHMP2AO43633 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.27■□□□□ 0.52
CHMP2AO43633 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CHMP2AO43633 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2AO43633 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2AO43633 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2AO43633 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2AO43633 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.27■□□□□ 0.52
CHMP2AO43633 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2AO43633 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CHMP2AO43633 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2AO43633 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2AO43633 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.27■□□□□ 0.52
CHMP2AO43633 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2AO43633 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2AO43633 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2AO43633 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2AO43633 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CHMP2AO43633 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2AO43633 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2AO43633 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.27■□□□□ 0.52
CHMP2AO43633 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.27■□□□□ 0.52
CHMP2AO43633 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.27■□□□□ 0.52
CHMP2AO43633 AL390754.1-201ENST00000619088 582 ntBASIC18.27■□□□□ 0.52
CHMP2AO43633 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
CHMP2AO43633 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2AO43633 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CHMP2AO43633 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMP2AO43633 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP2AO43633 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMP2AO43633 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP2AO43633 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.51
CHMP2AO43633 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.27■□□□□ 0.51
CHMP2AO43633 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP2AO43633 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms