Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN9O14815 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN9O14815 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CAPN9O14815 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CAPN9O14815 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN9O14815 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN9O14815 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
CAPN9O14815 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
CAPN9O14815 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.25■□□□□ 0.35
CAPN9O14815 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN9O14815 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.25■□□□□ 0.35
CAPN9O14815 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.25■□□□□ 0.35
CAPN9O14815 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.25■□□□□ 0.35
CAPN9O14815 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN9O14815 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN9O14815 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.25■□□□□ 0.35
CAPN9O14815 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN9O14815 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN9O14815 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN9O14815 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.25■□□□□ 0.35
CAPN9O14815 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN9O14815 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN9O14815 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN9O14815 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN9O14815 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN9O14815 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN9O14815 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CAPN9O14815 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN9O14815 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.24■□□□□ 0.35
CAPN9O14815 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN9O14815 AL592309.1-201ENST00000443127 649 ntBASIC17.24■□□□□ 0.35
CAPN9O14815 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN9O14815 AP000344.2-201ENST00000512987 629 ntBASIC17.24■□□□□ 0.35
CAPN9O14815 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.24■□□□□ 0.35
CAPN9O14815 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN9O14815 AC027307.2-201ENST00000591252 911 ntBASIC17.24■□□□□ 0.35
CAPN9O14815 AC022145.2-201ENST00000598203 171 ntBASIC17.24■□□□□ 0.35
CAPN9O14815 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.24■□□□□ 0.35
CAPN9O14815 AL596442.2-201ENST00000610240 980 ntBASIC17.24■□□□□ 0.35
CAPN9O14815 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.24■□□□□ 0.35
CAPN9O14815 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CAPN9O14815 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN9O14815 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN9O14815 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN9O14815 AC073439.1-201ENST00000624121 1774 ntBASIC17.24■□□□□ 0.35
CAPN9O14815 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CAPN9O14815 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CAPN9O14815 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN9O14815 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN9O14815 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN9O14815 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN9O14815 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.24■□□□□ 0.35
CAPN9O14815 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN9O14815 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CAPN9O14815 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN9O14815 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN9O14815 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN9O14815 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CAPN9O14815 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CAPN9O14815 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CAPN9O14815 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN9O14815 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN9O14815 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.23■□□□□ 0.35
CAPN9O14815 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CAPN9O14815 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.23■□□□□ 0.35
CAPN9O14815 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN9O14815 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.23■□□□□ 0.35
CAPN9O14815 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
CAPN9O14815 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN9O14815 AC254562.1-201ENST00000417586 456 ntBASIC17.23■□□□□ 0.35
CAPN9O14815 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.23■□□□□ 0.35
CAPN9O14815 AP006288.1-201ENST00000446065 395 ntBASIC17.23■□□□□ 0.35
CAPN9O14815 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.23■□□□□ 0.35
CAPN9O14815 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.23■□□□□ 0.35
CAPN9O14815 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.23■□□□□ 0.35
CAPN9O14815 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.23■□□□□ 0.35
CAPN9O14815 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.23■□□□□ 0.35
CAPN9O14815 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
CAPN9O14815 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CAPN9O14815 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CAPN9O14815 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.23■□□□□ 0.35
CAPN9O14815 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.23■□□□□ 0.35
CAPN9O14815 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.23■□□□□ 0.35
CAPN9O14815 AC004835.2-201ENST00000603762 682 ntBASIC17.23■□□□□ 0.35
CAPN9O14815 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.23■□□□□ 0.35
CAPN9O14815 AC008267.7-201ENST00000624570 1194 ntBASIC17.23■□□□□ 0.35
CAPN9O14815 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.23■□□□□ 0.35
CAPN9O14815 AL513210.1-201ENST00000629608 234 ntBASIC17.23■□□□□ 0.35
CAPN9O14815 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.23■□□□□ 0.35
CAPN9O14815 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.23■□□□□ 0.35
CAPN9O14815 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN9O14815 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN9O14815 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN9O14815 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN9O14815 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN9O14815 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN9O14815 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN9O14815 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CAPN9O14815 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CAPN9O14815 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms