Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RGPD3A6NKT7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC20.08■□□□□ 0.81
RGPD3A6NKT7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RGPD3A6NKT7 AL592424.1-201ENST00000563624 1536 ntBASIC20.08■□□□□ 0.81
RGPD3A6NKT7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RGPD3A6NKT7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 AC097359.3-201ENST00000603982 1210 ntBASIC20.08■□□□□ 0.8
RGPD3A6NKT7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RGPD3A6NKT7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC20.07■□□□□ 0.8
RGPD3A6NKT7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RGPD3A6NKT7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.07■□□□□ 0.8
RGPD3A6NKT7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC20.07■□□□□ 0.8
RGPD3A6NKT7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RGPD3A6NKT7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.07■□□□□ 0.8
RGPD3A6NKT7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RGPD3A6NKT7 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RGPD3A6NKT7 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RGPD3A6NKT7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RGPD3A6NKT7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RGPD3A6NKT7 CEP164P1-201ENST00000455142 418 ntBASIC20.07■□□□□ 0.8
RGPD3A6NKT7 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC20.07■□□□□ 0.8
RGPD3A6NKT7 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC20.07■□□□□ 0.8
RGPD3A6NKT7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RGPD3A6NKT7 RN7SL713P-201ENST00000582127 302 ntBASIC20.07■□□□□ 0.8
RGPD3A6NKT7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC20.07■□□□□ 0.8
RGPD3A6NKT7 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC20.07■□□□□ 0.8
RGPD3A6NKT7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RGPD3A6NKT7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RGPD3A6NKT7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.07■□□□□ 0.8
RGPD3A6NKT7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RGPD3A6NKT7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 AC234644.1-201ENST00000406065 370 ntBASIC20.06■□□□□ 0.8
RGPD3A6NKT7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 PTK2-225ENST00000520892 571 ntTSL 4 BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 SYT17-208ENST00000568433 812 ntTSL 3 BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 AC244157.2-201ENST00000616239 1006 ntBASIC20.06■□□□□ 0.8
RGPD3A6NKT7 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 LINC01144-201ENST00000626198 1710 ntBASIC20.06■□□□□ 0.8
RGPD3A6NKT7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 HNRNPA1P63-201ENST00000427917 963 ntBASIC20.06■□□□□ 0.8
RGPD3A6NKT7 PDIA3P2-201ENST00000428073 158 ntBASIC20.06■□□□□ 0.8
RGPD3A6NKT7 PHKG1P2-201ENST00000457537 863 ntBASIC20.06■□□□□ 0.8
RGPD3A6NKT7 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 AC103988.2-201ENST00000561804 725 ntBASIC20.06■□□□□ 0.8
RGPD3A6NKT7 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 PPY2P-201ENST00000582808 702 ntBASIC20.06■□□□□ 0.8
RGPD3A6NKT7 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RGPD3A6NKT7 AL450472.2-201ENST00000603663 1156 ntBASIC20.06■□□□□ 0.8
RGPD3A6NKT7 COX6A1P2-201ENST00000620597 330 ntBASIC20.06■□□□□ 0.8
RGPD3A6NKT7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RGPD3A6NKT7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RGPD3A6NKT7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC20.05■□□□□ 0.8
RGPD3A6NKT7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.05■□□□□ 0.8
RGPD3A6NKT7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RGPD3A6NKT7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RGPD3A6NKT7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RGPD3A6NKT7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RGPD3A6NKT7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RGPD3A6NKT7 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms