Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPDC1A2A3K4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PTPDC1A2A3K4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
PTPDC1A2A3K4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PTPDC1A2A3K4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PTPDC1A2A3K4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
PTPDC1A2A3K4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 LINC01225-203ENST00000563550 1244 ntBASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PTPDC1A2A3K4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 KRT8P23-201ENST00000560090 1207 ntBASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 AC011467.4-201ENST00000594891 528 ntBASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PTPDC1A2A3K4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 PAUPAR-201ENST00000630360 2965 ntBASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTPDC1A2A3K4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms