Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 MIR4321-201ENST00000592276 80 ntBASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 COX11-210ENST00000639671 696 ntBASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 AL645608.8-201ENST00000606034 2086 ntBASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 PCGF3-213ENST00000620529 1899 ntBASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 KRT43P-201ENST00000434019 910 ntBASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 AC092658.1-201ENST00000505836 891 ntBASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 AC008735.3-201ENST00000596646 500 ntBASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC187A0A096LP49 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC187A0A096LP49 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.33■□□□□ 0.05
CCDC187A0A096LP49 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC187A0A096LP49 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.33■□□□□ 0.05
CCDC187A0A096LP49 U82695.1-201ENST00000635752 1889 ntBASIC15.33■□□□□ 0.05
CCDC187A0A096LP49 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC187A0A096LP49 AC006538.1-201ENST00000567905 1585 ntBASIC15.33■□□□□ 0.05
CCDC187A0A096LP49 CYP4F24P-201ENST00000586049 1580 ntBASIC15.33■□□□□ 0.05
CCDC187A0A096LP49 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CCDC187A0A096LP49 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC187A0A096LP49 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms