Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 MED15P5-201ENST00000423150 992 ntBASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 KRT18P3-201ENST00000451602 1288 ntBASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 AL589702.1-201ENST00000641229 1509 ntBASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.34■□□□□ 0.69
CYP46A1Q9Y6A2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CYP46A1Q9Y6A2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CYP46A1Q9Y6A2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CYP46A1Q9Y6A2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CYP46A1Q9Y6A2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CYP46A1Q9Y6A2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CYP46A1Q9Y6A2 AC008677.1-201ENST00000519230 1561 ntBASIC19.33■□□□□ 0.69
CYP46A1Q9Y6A2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
CYP46A1Q9Y6A2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CYP46A1Q9Y6A2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 PRYP6-201ENST00000514804 343 ntBASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 AC112191.1-201ENST00000523689 701 ntBASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 AL365330.1-201ENST00000607459 531 ntBASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 FAM197Y3-203ENST00000618346 717 ntBASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CYP46A1Q9Y6A2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 AC002347.1-201ENST00000569543 541 ntBASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 AL139384.1-201ENST00000612143 3047 ntBASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CYP46A1Q9Y6A2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.31■□□□□ 0.68
CYP46A1Q9Y6A2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
CYP46A1Q9Y6A2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.31■□□□□ 0.68
CYP46A1Q9Y6A2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.31■□□□□ 0.68
CYP46A1Q9Y6A2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CYP46A1Q9Y6A2 PMS2P7-201ENST00000506558 1336 ntBASIC19.31■□□□□ 0.68
CYP46A1Q9Y6A2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CYP46A1Q9Y6A2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.31■□□□□ 0.68
CYP46A1Q9Y6A2 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms