Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 KRT19P2-202ENST00000557173 1012 ntBASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 U82695.1-201ENST00000635752 1889 ntBASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 AC126177.1-201ENST00000547829 2218 ntBASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 KRT18P34-201ENST00000488218 1270 ntBASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 AC018845.2-201ENST00000568326 409 ntBASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHGA11Q9Y5H2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 KRT18P2-201ENST00000447938 1258 ntBASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 RNA5SP416-201ENST00000516838 111 ntBASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDHGA11Q9Y5H2 AC106730.1-201ENST00000566722 1090 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms