Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HHLA3Q9XRX5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
HHLA3Q9XRX5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HHLA3Q9XRX5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
HHLA3Q9XRX5 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC11.99□□□□□ -0.49
HHLA3Q9XRX5 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HHLA3Q9XRX5 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC11.99□□□□□ -0.49
HHLA3Q9XRX5 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
HHLA3Q9XRX5 AP005117.1-202ENST00000581724 1908 ntBASIC11.99□□□□□ -0.49
HHLA3Q9XRX5 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
HHLA3Q9XRX5 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
HHLA3Q9XRX5 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HHLA3Q9XRX5 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HHLA3Q9XRX5 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
HHLA3Q9XRX5 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HHLA3Q9XRX5 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HHLA3Q9XRX5 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HHLA3Q9XRX5 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HHLA3Q9XRX5 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
HHLA3Q9XRX5 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 SUPT20HL2-201ENST00000486479 2409 ntBASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 HNRNPDP1-201ENST00000439535 754 ntBASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 AC018712.1-201ENST00000455767 687 ntBASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 AL662844.1-201ENST00000546340 181 ntBASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 AL356488.2-201ENST00000602755 427 ntBASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 PPT1-215ENST00000641471 2368 ntBASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC11.98□□□□□ -0.49
HHLA3Q9XRX5 AC104581.4-201ENST00000623126 3052 ntBASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 KRT8P49-201ENST00000604166 1432 ntBASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 POLL-206ENST00000370172 2308 ntTSL 2 BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HHLA3Q9XRX5 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms