Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 AL589702.1-201ENST00000641229 1509 ntBASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 TSEN15P1-201ENST00000423257 515 ntBASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 AC142381.1-201ENST00000426099 345 ntBASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 AC098859.1-201ENST00000502915 1238 ntBASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 SLC25A39P2-201ENST00000537614 270 ntBASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 KRT18P28-201ENST00000453838 1332 ntBASIC15.43■□□□□ 0.06
PRDM9Q9NQV7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 FAM58DP-201ENST00000428076 619 ntBASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 AC103798.2-201ENST00000624292 632 ntBASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 AL596087.1-201ENST00000400979 1969 ntBASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PRDM9Q9NQV7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRDM9Q9NQV7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms