Protein–RNA interactions for Protein: Q9NQC8

IFT46, Intraflagellar transport protein 46 homolog, humanhuman

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46Q9NQC8 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 SPDYE13P-201ENST00000445314 798 ntBASIC14.14□□□□□ -0.15
IFT46Q9NQC8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 AC083849.1-201ENST00000615227 514 ntBASIC14.14□□□□□ -0.15
IFT46Q9NQC8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 AC079781.5-202ENST00000641784 3743 ntBASIC14.14□□□□□ -0.15
IFT46Q9NQC8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 AC073347.1-201ENST00000421633 2643 ntBASIC14.14□□□□□ -0.15
IFT46Q9NQC8 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
IFT46Q9NQC8 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 TP73-AS1-210ENST00000637775 1455 ntBASIC14.13□□□□□ -0.15
IFT46Q9NQC8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 LINC00982-205ENST00000420957 435 ntBASIC14.13□□□□□ -0.15
IFT46Q9NQC8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 AC139749.1-202ENST00000617529 3139 ntBASIC14.13□□□□□ -0.15
IFT46Q9NQC8 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 PMPCAP1-201ENST00000508114 1576 ntBASIC14.13□□□□□ -0.15
IFT46Q9NQC8 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFT46Q9NQC8 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms