Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRPM3Q9HCF6 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
TRPM3Q9HCF6 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC21.41■■□□□ 1.02
TRPM3Q9HCF6 AL133267.1-201ENST00000398220 340 ntBASIC21.41■■□□□ 1.02
TRPM3Q9HCF6 MIR663B-201ENST00000408361 115 ntBASIC21.41■■□□□ 1.02
TRPM3Q9HCF6 FAM197Y7-201ENST00000432892 766 ntBASIC21.41■■□□□ 1.02
TRPM3Q9HCF6 C2orf27AP3-201ENST00000434123 579 ntBASIC21.41■■□□□ 1.02
TRPM3Q9HCF6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRPM3Q9HCF6 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRPM3Q9HCF6 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC21.41■■□□□ 1.02
TRPM3Q9HCF6 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC21.41■■□□□ 1.02
TRPM3Q9HCF6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRPM3Q9HCF6 AL354718.3-201ENST00000616414 581 ntBASIC21.41■■□□□ 1.02
TRPM3Q9HCF6 CR382287.1-201ENST00000623954 586 ntBASIC21.41■■□□□ 1.02
TRPM3Q9HCF6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRPM3Q9HCF6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 RNF216P1-203ENST00000404404 2427 ntBASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 REXO1L1P-202ENST00000608646 1974 ntBASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 AP006547.1-201ENST00000563435 692 ntBASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
TRPM3Q9HCF6 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC21.39■■□□□ 1.02
TRPM3Q9HCF6 AC018735.1-201ENST00000437208 1502 ntBASIC21.39■■□□□ 1.02
TRPM3Q9HCF6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRPM3Q9HCF6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRPM3Q9HCF6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TRPM3Q9HCF6 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRPM3Q9HCF6 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRPM3Q9HCF6 ACTBP8-201ENST00000403258 1108 ntBASIC21.39■■□□□ 1.01
TRPM3Q9HCF6 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC21.39■■□□□ 1.01
TRPM3Q9HCF6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
TRPM3Q9HCF6 GAPDHP40-201ENST00000505218 1006 ntBASIC21.39■■□□□ 1.01
TRPM3Q9HCF6 SCARNA20.5-201ENST00000516991 142 ntBASIC21.39■■□□□ 1.01
TRPM3Q9HCF6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC21.39■■□□□ 1.01
TRPM3Q9HCF6 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRPM3Q9HCF6 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC21.39■■□□□ 1.01
TRPM3Q9HCF6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC21.39■■□□□ 1.01
TRPM3Q9HCF6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.01
TRPM3Q9HCF6 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRPM3Q9HCF6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRPM3Q9HCF6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.39■■□□□ 1.01
TRPM3Q9HCF6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRPM3Q9HCF6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 AP001582.1-201ENST00000525856 295 ntBASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
TRPM3Q9HCF6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms