Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EFCC1Q9HA90 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
EFCC1Q9HA90 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
EFCC1Q9HA90 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EFCC1Q9HA90 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
EFCC1Q9HA90 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EFCC1Q9HA90 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.95■□□□□ 0.62
EFCC1Q9HA90 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
EFCC1Q9HA90 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EFCC1Q9HA90 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EFCC1Q9HA90 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EFCC1Q9HA90 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EFCC1Q9HA90 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EFCC1Q9HA90 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EFCC1Q9HA90 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.95■□□□□ 0.62
EFCC1Q9HA90 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.95■□□□□ 0.62
EFCC1Q9HA90 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.95■□□□□ 0.62
EFCC1Q9HA90 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.94■□□□□ 0.62
EFCC1Q9HA90 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 SPDYE18-201ENST00000510091 1050 ntBASIC18.94■□□□□ 0.62
EFCC1Q9HA90 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
EFCC1Q9HA90 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 AL136379.1-201ENST00000623471 2642 ntBASIC18.93■□□□□ 0.62
EFCC1Q9HA90 AC134043.2-201ENST00000624206 2238 ntBASIC18.93■□□□□ 0.62
EFCC1Q9HA90 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 MEP1AP4-201ENST00000423244 1087 ntBASIC18.93■□□□□ 0.62
EFCC1Q9HA90 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 ELK1P1-201ENST00000485699 580 ntBASIC18.93■□□□□ 0.62
EFCC1Q9HA90 AC104989.1-201ENST00000519711 778 ntBASIC18.93■□□□□ 0.62
EFCC1Q9HA90 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 CTBP2P3-201ENST00000585629 1255 ntBASIC18.93■□□□□ 0.62
EFCC1Q9HA90 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EFCC1Q9HA90 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms