Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TRIM2Q9C040 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.04■□□□□ -0
TRIM2Q9C040 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 MIR648-201ENST00000385046 94 ntBASIC15.04■□□□□ -0
TRIM2Q9C040 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 MIR1233-2-201ENST00000408138 82 ntBASIC15.04■□□□□ -0
TRIM2Q9C040 MIR1233-1-201ENST00000408722 82 ntBASIC15.04■□□□□ -0
TRIM2Q9C040 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.04■□□□□ -0
TRIM2Q9C040 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.04■□□□□ -0
TRIM2Q9C040 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.04■□□□□ -0
TRIM2Q9C040 RNA5SP416-201ENST00000516838 111 ntBASIC15.04■□□□□ -0
TRIM2Q9C040 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.04■□□□□ -0
TRIM2Q9C040 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.04■□□□□ -0
TRIM2Q9C040 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.04■□□□□ -0
TRIM2Q9C040 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
TRIM2Q9C040 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.04■□□□□ -0
TRIM2Q9C040 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
TRIM2Q9C040 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
TRIM2Q9C040 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.04■□□□□ -0
TRIM2Q9C040 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.04■□□□□ -0
TRIM2Q9C040 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.04■□□□□ -0
TRIM2Q9C040 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.04■□□□□ -0
TRIM2Q9C040 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 AL603832.2-201ENST00000566195 2125 ntBASIC15.04■□□□□ -0
TRIM2Q9C040 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
TRIM2Q9C040 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM2Q9C040 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM2Q9C040 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRIM2Q9C040 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM2Q9C040 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM2Q9C040 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.03■□□□□ -0
TRIM2Q9C040 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM2Q9C040 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.03■□□□□ -0
TRIM2Q9C040 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.03■□□□□ -0
TRIM2Q9C040 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM2Q9C040 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM2Q9C040 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.03■□□□□ -0
TRIM2Q9C040 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM2Q9C040 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM2Q9C040 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
TRIM2Q9C040 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.03■□□□□ -0
TRIM2Q9C040 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.03■□□□□ -0
TRIM2Q9C040 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.03■□□□□ -0
TRIM2Q9C040 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM2Q9C040 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM2Q9C040 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM2Q9C040 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRIM2Q9C040 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.03■□□□□ -0
TRIM2Q9C040 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
TRIM2Q9C040 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.03■□□□□ -0
TRIM2Q9C040 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
TRIM2Q9C040 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRIM2Q9C040 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.03■□□□□ -0
TRIM2Q9C040 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM2Q9C040 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM2Q9C040 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRIM2Q9C040 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRIM2Q9C040 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.03■□□□□ -0
TRIM2Q9C040 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.03■□□□□ -0
TRIM2Q9C040 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM2Q9C040 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM2Q9C040 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM2Q9C040 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.03■□□□□ -0
TRIM2Q9C040 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.03■□□□□ -0
TRIM2Q9C040 AC024909.3-201ENST00000611513 2257 ntBASIC15.03■□□□□ -0
TRIM2Q9C040 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM2Q9C040 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM2Q9C040 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM2Q9C040 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRIM2Q9C040 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM2Q9C040 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM2Q9C040 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM2Q9C040 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TRIM2Q9C040 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRIM2Q9C040 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.02■□□□□ -0
TRIM2Q9C040 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TRIM2Q9C040 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM2Q9C040 AC008894.3-201ENST00000624324 3103 ntBASIC15.02■□□□□ -0
TRIM2Q9C040 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM2Q9C040 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.02■□□□□ -0
TRIM2Q9C040 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM2Q9C040 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.02■□□□□ -0
TRIM2Q9C040 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.02■□□□□ -0
TRIM2Q9C040 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM2Q9C040 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM2Q9C040 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRIM2Q9C040 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms