Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.75■□□□□ 0.27
CDCA3Q99618 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDCA3Q99618 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.75■□□□□ 0.27
CDCA3Q99618 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CDCA3Q99618 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CDCA3Q99618 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.75■□□□□ 0.27
CDCA3Q99618 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDCA3Q99618 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CDCA3Q99618 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDCA3Q99618 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDCA3Q99618 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDCA3Q99618 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDCA3Q99618 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.74■□□□□ 0.27
CDCA3Q99618 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDCA3Q99618 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDCA3Q99618 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDCA3Q99618 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.74■□□□□ 0.27
CDCA3Q99618 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDCA3Q99618 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.74■□□□□ 0.27
CDCA3Q99618 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDCA3Q99618 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDCA3Q99618 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDCA3Q99618 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.74■□□□□ 0.27
CDCA3Q99618 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDCA3Q99618 MIR1247-201ENST00000408206 136 ntBASIC16.74■□□□□ 0.27
CDCA3Q99618 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDCA3Q99618 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.74■□□□□ 0.27
CDCA3Q99618 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDCA3Q99618 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.74■□□□□ 0.27
CDCA3Q99618 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDCA3Q99618 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.74■□□□□ 0.27
CDCA3Q99618 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.74■□□□□ 0.27
CDCA3Q99618 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDCA3Q99618 AC243960.2-201ENST00000600996 747 ntBASIC16.74■□□□□ 0.27
CDCA3Q99618 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.74■□□□□ 0.27
CDCA3Q99618 AC008687.7-202ENST00000637404 953 ntBASIC16.74■□□□□ 0.27
CDCA3Q99618 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDCA3Q99618 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.74■□□□□ 0.27
CDCA3Q99618 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.74■□□□□ 0.27
CDCA3Q99618 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDCA3Q99618 LETM1P2-201ENST00000597330 2178 ntBASIC16.74■□□□□ 0.27
CDCA3Q99618 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDCA3Q99618 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDCA3Q99618 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDCA3Q99618 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.73■□□□□ 0.27
CDCA3Q99618 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.73■□□□□ 0.27
CDCA3Q99618 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.73■□□□□ 0.27
CDCA3Q99618 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDCA3Q99618 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDCA3Q99618 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.73■□□□□ 0.27
CDCA3Q99618 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.73■□□□□ 0.27
CDCA3Q99618 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
CDCA3Q99618 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDCA3Q99618 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.73■□□□□ 0.27
CDCA3Q99618 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDCA3Q99618 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CDCA3Q99618 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDCA3Q99618 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.73■□□□□ 0.27
CDCA3Q99618 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.73■□□□□ 0.27
CDCA3Q99618 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDCA3Q99618 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDCA3Q99618 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDCA3Q99618 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.73■□□□□ 0.27
CDCA3Q99618 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.73■□□□□ 0.27
CDCA3Q99618 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.73■□□□□ 0.27
CDCA3Q99618 KRT90P-201ENST00000549264 1064 ntBASIC16.73■□□□□ 0.27
CDCA3Q99618 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.73■□□□□ 0.27
CDCA3Q99618 MIR3615-201ENST00000581999 87 ntBASIC16.73■□□□□ 0.27
CDCA3Q99618 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.73■□□□□ 0.27
CDCA3Q99618 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.73■□□□□ 0.27
CDCA3Q99618 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.73■□□□□ 0.27
CDCA3Q99618 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDCA3Q99618 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.73■□□□□ 0.27
CDCA3Q99618 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDCA3Q99618 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.73■□□□□ 0.27
CDCA3Q99618 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDCA3Q99618 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDCA3Q99618 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDCA3Q99618 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDCA3Q99618 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDCA3Q99618 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.73■□□□□ 0.27
CDCA3Q99618 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDCA3Q99618 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDCA3Q99618 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.72■□□□□ 0.27
CDCA3Q99618 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.72■□□□□ 0.27
CDCA3Q99618 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA3Q99618 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.72■□□□□ 0.27
CDCA3Q99618 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA3Q99618 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CDCA3Q99618 AC090340.1-201ENST00000620778 4980 ntBASIC16.72■□□□□ 0.27
CDCA3Q99618 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA3Q99618 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA3Q99618 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA3Q99618 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA3Q99618 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA3Q99618 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDCA3Q99618 AC004945.1-201ENST00000416738 983 ntBASIC16.72■□□□□ 0.27
CDCA3Q99618 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.72■□□□□ 0.27
CDCA3Q99618 C2orf27AP3-201ENST00000434123 579 ntBASIC16.72■□□□□ 0.27
CDCA3Q99618 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms