Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 RPL8P2-201ENST00000430538 502 ntBASIC4.81□□□□□ -1.64
HMCN1Q96RW7 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AC107373.2-201ENST00000607735 490 ntBASIC4.81□□□□□ -1.64
HMCN1Q96RW7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AP000356.3-201ENST00000382243 753 ntBASIC4.81□□□□□ -1.64
HMCN1Q96RW7 MIR566-201ENST00000385187 94 ntBASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AC026470.1-201ENST00000478038 846 ntBASIC4.81□□□□□ -1.64
HMCN1Q96RW7 RN7SL67P-201ENST00000492147 296 ntBASIC4.81□□□□□ -1.64
HMCN1Q96RW7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AC020916.1-201ENST00000587762 1774 ntBASIC4.81□□□□□ -1.64
HMCN1Q96RW7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AL109809.1-201ENST00000418979 1367 ntBASIC4.81□□□□□ -1.64
HMCN1Q96RW7 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 INO80E-209ENST00000567254 625 ntTSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 PAM16-211ENST00000575848 518 ntTSL 3 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AC024267.1-201ENST00000582320 895 ntBASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AC080013.5-201ENST00000607044 679 ntBASIC4.81□□□□□ -1.64
HMCN1Q96RW7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 POR-209ENST00000439269 1858 ntTSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 NHP2-202ENST00000314397 599 ntTSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC4.81□□□□□ -1.64
HMCN1Q96RW7 AC073150.1-201ENST00000450406 1084 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms