Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 AL603756.1-201ENST00000606511 2163 ntBASIC18.81■□□□□ 0.6
CDCA5Q96FF9 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDCA5Q96FF9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 AC104306.2-201ENST00000451877 341 ntBASIC18.8■□□□□ 0.6
CDCA5Q96FF9 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.8■□□□□ 0.6
CDCA5Q96FF9 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 AL607033.1-201ENST00000623900 1599 ntBASIC18.8■□□□□ 0.6
CDCA5Q96FF9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.8■□□□□ 0.6
CDCA5Q96FF9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 C2orf27AP3-201ENST00000434123 579 ntBASIC18.79■□□□□ 0.6
CDCA5Q96FF9 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 AC243562.2-201ENST00000561247 970 ntBASIC18.79■□□□□ 0.6
CDCA5Q96FF9 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 AL354718.3-201ENST00000616414 581 ntBASIC18.79■□□□□ 0.6
CDCA5Q96FF9 CR382287.1-201ENST00000623954 586 ntBASIC18.79■□□□□ 0.6
CDCA5Q96FF9 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDCA5Q96FF9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDCA5Q96FF9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDCA5Q96FF9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCA5Q96FF9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CDCA5Q96FF9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCA5Q96FF9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCA5Q96FF9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCA5Q96FF9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CDCA5Q96FF9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CDCA5Q96FF9 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCA5Q96FF9 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCA5Q96FF9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms