Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 HTR5BP-201ENST00000430851 1154 ntBASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 METTL21AP1-201ENST00000438852 635 ntBASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 AC108073.2-201ENST00000464002 357 ntBASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 RPS15P9-201ENST00000494093 319 ntBASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 AC004817.3-201ENST00000602957 2129 ntBASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 AL596442.2-201ENST00000610240 980 ntBASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 AC010654.1-201ENST00000615722 808 ntBASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 AC009336.1-201ENST00000608941 1553 ntBASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GRAMD1AQ96CP6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 KLF4P1-201ENST00000412782 1185 ntBASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 ELK2BP-201ENST00000415014 1224 ntBASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 AL513190.1-201ENST00000621254 727 ntBASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 AL805961.1-202ENST00000641562 540 ntBASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 AC006504.4-201ENST00000592118 1568 ntBASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GRAMD1AQ96CP6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 ELL2P1-201ENST00000413990 1906 ntBASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 AL645939.2-201ENST00000427340 991 ntBASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 CNN2P11-201ENST00000429351 262 ntBASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
GRAMD1AQ96CP6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms