Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 AC092474.2-201ENST00000424288 719 ntBASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 AC007967.2-201ENST00000432613 625 ntBASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 AL078644.1-201ENST00000609881 752 ntBASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 AC007064.4-201ENST00000637740 555 ntBASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC83Q8IWF9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 BANP-201ENST00000286122 2368 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC83Q8IWF9 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 TPM4P1-201ENST00000436100 807 ntBASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 AC140658.5-201ENST00000438532 169 ntBASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 KRT18P34-201ENST00000488218 1270 ntBASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 KRT19P2-202ENST00000557173 1012 ntBASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 AC145285.3-201ENST00000564603 959 ntBASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC83Q8IWF9 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms