Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LGSNQ5TDP6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LGSNQ5TDP6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LGSNQ5TDP6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.51■□□□□ 0.23
LGSNQ5TDP6 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LGSNQ5TDP6 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LGSNQ5TDP6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 AC091076.1-201ENST00000610741 619 ntBASIC16.5■□□□□ 0.23
LGSNQ5TDP6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.5■□□□□ 0.23
LGSNQ5TDP6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.5■□□□□ 0.23
LGSNQ5TDP6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 SART3-203ENST00000546611 1184 ntBASIC16.49■□□□□ 0.23
LGSNQ5TDP6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 AL732292.2-201ENST00000609649 430 ntBASIC16.49■□□□□ 0.23
LGSNQ5TDP6 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.49■□□□□ 0.23
LGSNQ5TDP6 MST1L-201ENST00000442552 2185 ntBASIC16.48■□□□□ 0.23
LGSNQ5TDP6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 AC006504.4-201ENST00000592118 1568 ntBASIC16.48■□□□□ 0.23
LGSNQ5TDP6 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 LAGE3P1-201ENST00000425356 484 ntBASIC16.48■□□□□ 0.23
LGSNQ5TDP6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 AL121772.3-201ENST00000610840 674 ntBASIC16.48■□□□□ 0.23
LGSNQ5TDP6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 AL513477.1-201ENST00000602865 2407 ntBASIC16.48■□□□□ 0.23
LGSNQ5TDP6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.48■□□□□ 0.23
LGSNQ5TDP6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms