Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.51■□□□□ 0.23
PRAMEP78395 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.51■□□□□ 0.23
PRAMEP78395 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.51■□□□□ 0.23
PRAMEP78395 SLC25A1P1-201ENST00000528351 927 ntBASIC16.51■□□□□ 0.23
PRAMEP78395 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEP78395 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.51■□□□□ 0.23
PRAMEP78395 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.51■□□□□ 0.23
PRAMEP78395 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.51■□□□□ 0.23
PRAMEP78395 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.51■□□□□ 0.23
PRAMEP78395 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEP78395 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.51■□□□□ 0.23
PRAMEP78395 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PRAMEP78395 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEP78395 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
PRAMEP78395 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEP78395 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEP78395 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.5■□□□□ 0.23
PRAMEP78395 AC005622.1-201ENST00000636801 1703 ntBASIC16.5■□□□□ 0.23
PRAMEP78395 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PRAMEP78395 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.5■□□□□ 0.23
PRAMEP78395 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.5■□□□□ 0.23
PRAMEP78395 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEP78395 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEP78395 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEP78395 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEP78395 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEP78395 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEP78395 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.5■□□□□ 0.23
PRAMEP78395 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEP78395 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.5■□□□□ 0.23
PRAMEP78395 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PRAMEP78395 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEP78395 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.5■□□□□ 0.23
PRAMEP78395 MED15P5-201ENST00000423150 992 ntBASIC16.5■□□□□ 0.23
PRAMEP78395 AC140658.5-201ENST00000438532 169 ntBASIC16.5■□□□□ 0.23
PRAMEP78395 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.5■□□□□ 0.23
PRAMEP78395 KRT18P34-201ENST00000488218 1270 ntBASIC16.5■□□□□ 0.23
PRAMEP78395 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.5■□□□□ 0.23
PRAMEP78395 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PRAMEP78395 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEP78395 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.5■□□□□ 0.23
PRAMEP78395 AC106730.1-201ENST00000566722 1090 ntBASIC16.5■□□□□ 0.23
PRAMEP78395 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.5■□□□□ 0.23
PRAMEP78395 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.5■□□□□ 0.23
PRAMEP78395 AC027601.4-201ENST00000611259 610 ntBASIC16.5■□□□□ 0.23
PRAMEP78395 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.5■□□□□ 0.23
PRAMEP78395 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.5■□□□□ 0.23
PRAMEP78395 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEP78395 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PRAMEP78395 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEP78395 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEP78395 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEP78395 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PRAMEP78395 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEP78395 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEP78395 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEP78395 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRAMEP78395 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.5■□□□□ 0.23
PRAMEP78395 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.49■□□□□ 0.23
PRAMEP78395 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.49■□□□□ 0.23
PRAMEP78395 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.49■□□□□ 0.23
PRAMEP78395 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PRAMEP78395 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PRAMEP78395 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PRAMEP78395 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PRAMEP78395 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.49■□□□□ 0.23
PRAMEP78395 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PRAMEP78395 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.49■□□□□ 0.23
PRAMEP78395 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.49■□□□□ 0.23
PRAMEP78395 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.49■□□□□ 0.23
PRAMEP78395 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PRAMEP78395 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.49■□□□□ 0.23
PRAMEP78395 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.49■□□□□ 0.23
PRAMEP78395 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.49■□□□□ 0.23
PRAMEP78395 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.49■□□□□ 0.23
PRAMEP78395 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.49■□□□□ 0.23
PRAMEP78395 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PRAMEP78395 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.49■□□□□ 0.23
PRAMEP78395 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEP78395 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms