Protein–RNA interactions for Protein: P59665

DEFA1, Neutrophil defensin 1, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA1P59665 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.34□□□□□ -0.11
DEFA1P59665 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA1P59665 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA1P59665 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA1P59665 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA1P59665 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.34□□□□□ -0.11
DEFA1P59665 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA1P59665 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA1P59665 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA1P59665 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA1P59665 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA1P59665 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA1P59665 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.34□□□□□ -0.11
DEFA1P59665 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
DEFA1P59665 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
DEFA1P59665 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.34□□□□□ -0.11
DEFA1P59665 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA1P59665 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA1P59665 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
DEFA1P59665 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
DEFA1P59665 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
DEFA1P59665 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
DEFA1P59665 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
DEFA1P59665 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
DEFA1P59665 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
DEFA1P59665 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.33□□□□□ -0.11
DEFA1P59665 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.11
DEFA1P59665 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
DEFA1P59665 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
DEFA1P59665 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA1P59665 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA1P59665 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA1P59665 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC14.33□□□□□ -0.12
DEFA1P59665 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA1P59665 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA1P59665 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.33□□□□□ -0.12
DEFA1P59665 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.33□□□□□ -0.12
DEFA1P59665 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.33□□□□□ -0.12
DEFA1P59665 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
DEFA1P59665 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA1P59665 AC083906.2-201ENST00000511578 360 ntBASIC14.33□□□□□ -0.12
DEFA1P59665 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
DEFA1P59665 AC024563.2-201ENST00000603282 481 ntBASIC14.33□□□□□ -0.12
DEFA1P59665 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.33□□□□□ -0.12
DEFA1P59665 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
DEFA1P59665 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
DEFA1P59665 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.33□□□□□ -0.12
DEFA1P59665 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA1P59665 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA1P59665 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA1P59665 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA1P59665 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA1P59665 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA1P59665 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
DEFA1P59665 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
DEFA1P59665 AC006504.5-208ENST00000588784 2401 ntBASIC14.33□□□□□ -0.12
DEFA1P59665 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA1P59665 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA1P59665 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA1P59665 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA1P59665 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA1P59665 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA1P59665 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.33□□□□□ -0.12
DEFA1P59665 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA1P59665 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
DEFA1P59665 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
DEFA1P59665 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA1P59665 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.33□□□□□ -0.12
DEFA1P59665 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
DEFA1P59665 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA1P59665 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
DEFA1P59665 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.32□□□□□ -0.12
DEFA1P59665 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA1P59665 LINC01144-201ENST00000626198 1710 ntBASIC14.32□□□□□ -0.12
DEFA1P59665 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
DEFA1P59665 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA1P59665 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA1P59665 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA1P59665 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.32□□□□□ -0.12
DEFA1P59665 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA1P59665 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.32□□□□□ -0.12
DEFA1P59665 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.32□□□□□ -0.12
DEFA1P59665 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA1P59665 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
DEFA1P59665 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA1P59665 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
DEFA1P59665 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.32□□□□□ -0.12
DEFA1P59665 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA1P59665 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.32□□□□□ -0.12
DEFA1P59665 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA1P59665 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA1P59665 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA1P59665 AC010460.3-201ENST00000511359 1579 ntBASIC14.32□□□□□ -0.12
DEFA1P59665 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
DEFA1P59665 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.32□□□□□ -0.12
DEFA1P59665 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA1P59665 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEFA1P59665 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.32□□□□□ -0.12
DEFA1P59665 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
DEFA1P59665 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms