Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH11P55287 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
CDH11P55287 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH11P55287 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH11P55287 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH11P55287 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH11P55287 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH11P55287 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.01□□□□□ -0.01
CDH11P55287 AL353135.1-201ENST00000606729 504 ntBASIC15.01□□□□□ -0.01
CDH11P55287 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.01□□□□□ -0.01
CDH11P55287 AC139530.3-201ENST00000620344 690 ntBASIC15.01□□□□□ -0.01
CDH11P55287 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.01□□□□□ -0.01
CDH11P55287 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CDH11P55287 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH11P55287 AC068418.2-201ENST00000577309 3703 ntBASIC15.01□□□□□ -0.01
CDH11P55287 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH11P55287 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH11P55287 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH11P55287 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH11P55287 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 DBET-201ENST00000630918 3363 ntBASIC15.01□□□□□ -0.01
CDH11P55287 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH11P55287 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH11P55287 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH11P55287 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CDH11P55287 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDH11P55287 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15□□□□□ -0.01
CDH11P55287 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH11P55287 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15□□□□□ -0.01
CDH11P55287 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15□□□□□ -0.01
CDH11P55287 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH11P55287 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15□□□□□ -0.01
CDH11P55287 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH11P55287 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15□□□□□ -0.01
CDH11P55287 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CDH11P55287 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15□□□□□ -0.01
CDH11P55287 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH11P55287 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
CDH11P55287 AC006504.4-201ENST00000592118 1568 ntBASIC15□□□□□ -0.01
CDH11P55287 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CDH11P55287 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH11P55287 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH11P55287 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15□□□□□ -0.01
CDH11P55287 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CDH11P55287 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15□□□□□ -0.01
CDH11P55287 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15□□□□□ -0.01
CDH11P55287 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH11P55287 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
CDH11P55287 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15□□□□□ -0.01
CDH11P55287 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15□□□□□ -0.01
CDH11P55287 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15□□□□□ -0.01
CDH11P55287 MIR4751-201ENST00000578027 74 ntBASIC15□□□□□ -0.01
CDH11P55287 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15□□□□□ -0.01
CDH11P55287 AL139424.1-201ENST00000607572 797 ntBASIC15□□□□□ -0.01
CDH11P55287 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15□□□□□ -0.01
CDH11P55287 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH11P55287 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15□□□□□ -0.01
CDH11P55287 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH11P55287 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CDH11P55287 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CDH11P55287 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH11P55287 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH11P55287 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CDH11P55287 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH11P55287 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH11P55287 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH11P55287 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH11P55287 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH11P55287 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.99□□□□□ -0.01
CDH11P55287 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH11P55287 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH11P55287 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH11P55287 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH11P55287 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH11P55287 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH11P55287 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH11P55287 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH11P55287 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.99□□□□□ -0.01
CDH11P55287 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms