Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.98■□□□□ 0.31
CDH6P55285 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH6P55285 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH6P55285 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH6P55285 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.98■□□□□ 0.31
CDH6P55285 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH6P55285 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH6P55285 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.97■□□□□ 0.31
CDH6P55285 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CDH6P55285 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CDH6P55285 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH6P55285 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH6P55285 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.97■□□□□ 0.31
CDH6P55285 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH6P55285 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CDH6P55285 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH6P55285 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH6P55285 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH6P55285 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CDH6P55285 CICP6-201ENST00000457191 2729 ntBASIC16.97■□□□□ 0.31
CDH6P55285 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH6P55285 MIR648-201ENST00000385046 94 ntBASIC16.97■□□□□ 0.31
CDH6P55285 AP000347.1-202ENST00000435868 847 ntBASIC16.97■□□□□ 0.31
CDH6P55285 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH6P55285 PRYP6-201ENST00000514804 343 ntBASIC16.97■□□□□ 0.31
CDH6P55285 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.97■□□□□ 0.31
CDH6P55285 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CDH6P55285 AC002347.1-201ENST00000569543 541 ntBASIC16.97■□□□□ 0.31
CDH6P55285 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.97■□□□□ 0.31
CDH6P55285 AC091812.2-201ENST00000619081 385 ntBASIC16.97■□□□□ 0.31
CDH6P55285 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CDH6P55285 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
CDH6P55285 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH6P55285 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH6P55285 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CDH6P55285 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH6P55285 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH6P55285 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH6P55285 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH6P55285 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CDH6P55285 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH6P55285 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH6P55285 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH6P55285 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH6P55285 PMS2P7-201ENST00000506558 1336 ntBASIC16.96■□□□□ 0.31
CDH6P55285 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH6P55285 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH6P55285 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH6P55285 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH6P55285 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH6P55285 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CDH6P55285 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH6P55285 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH6P55285 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH6P55285 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH6P55285 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH6P55285 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CDH6P55285 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH6P55285 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH6P55285 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH6P55285 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH6P55285 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH6P55285 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH6P55285 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH6P55285 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH6P55285 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CDH6P55285 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH6P55285 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH6P55285 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH6P55285 RARRES2P8-201ENST00000566335 367 ntBASIC16.96■□□□□ 0.31
CDH6P55285 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH6P55285 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.96■□□□□ 0.31
CDH6P55285 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CDH6P55285 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CDH6P55285 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH6P55285 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH6P55285 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH6P55285 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH6P55285 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH6P55285 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH6P55285 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
CDH6P55285 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CDH6P55285 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH6P55285 CDC14C-201ENST00000428251 1719 ntBASIC16.96■□□□□ 0.3
CDH6P55285 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.96■□□□□ 0.3
CDH6P55285 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH6P55285 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.96■□□□□ 0.3
CDH6P55285 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH6P55285 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH6P55285 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH6P55285 NFIC-211ENST00000641145 8399 ntBASIC16.95■□□□□ 0.3
CDH6P55285 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH6P55285 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
CDH6P55285 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH6P55285 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH6P55285 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH6P55285 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CDH6P55285 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH6P55285 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH6P55285 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms