Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 AC092364.2-201ENST00000596710 2692 ntBASIC16.61■□□□□ 0.25
CDH4P55283 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH4P55283 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH4P55283 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH4P55283 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CDH4P55283 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH4P55283 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.6■□□□□ 0.25
CDH4P55283 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH4P55283 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH4P55283 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH4P55283 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.6■□□□□ 0.25
CDH4P55283 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH4P55283 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH4P55283 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CDH4P55283 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CDH4P55283 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH4P55283 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH4P55283 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CDH4P55283 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.6■□□□□ 0.25
CDH4P55283 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CDH4P55283 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.6■□□□□ 0.25
CDH4P55283 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.6■□□□□ 0.25
CDH4P55283 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH4P55283 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.6■□□□□ 0.25
CDH4P55283 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.6■□□□□ 0.25
CDH4P55283 AC005498.2-205ENST00000593218 784 ntBASIC16.6■□□□□ 0.25
CDH4P55283 AL390955.2-201ENST00000603032 514 ntBASIC16.6■□□□□ 0.25
CDH4P55283 SPDYE12P-201ENST00000618416 771 ntBASIC16.6■□□□□ 0.25
CDH4P55283 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.6■□□□□ 0.25
CDH4P55283 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH4P55283 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH4P55283 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH4P55283 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH4P55283 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDH4P55283 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDH4P55283 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH4P55283 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH4P55283 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH4P55283 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH4P55283 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH4P55283 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH4P55283 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CDH4P55283 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH4P55283 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH4P55283 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH4P55283 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH4P55283 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH4P55283 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH4P55283 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH4P55283 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH4P55283 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH4P55283 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH4P55283 AC092580.3-201ENST00000430932 139 ntBASIC16.59■□□□□ 0.25
CDH4P55283 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH4P55283 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.59■□□□□ 0.25
CDH4P55283 IGHV3-42-201ENST00000520410 361 ntBASIC16.59■□□□□ 0.25
CDH4P55283 AC027369.6-201ENST00000525520 931 ntBASIC16.59■□□□□ 0.25
CDH4P55283 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.59■□□□□ 0.25
CDH4P55283 AL079307.3-201ENST00000556114 283 ntBASIC16.59■□□□□ 0.25
CDH4P55283 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH4P55283 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH4P55283 AL138828.2-201ENST00000615812 383 ntBASIC16.59■□□□□ 0.25
CDH4P55283 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CDH4P55283 CROCCP1-201ENST00000426910 5675 ntBASIC16.59■□□□□ 0.25
CDH4P55283 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH4P55283 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH4P55283 AL118508.1-201ENST00000613502 2345 ntBASIC16.59■□□□□ 0.25
CDH4P55283 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH4P55283 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH4P55283 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH4P55283 AL662844.4-201ENST00000606367 2838 ntBASIC16.59■□□□□ 0.25
CDH4P55283 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH4P55283 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
CDH4P55283 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH4P55283 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.59■□□□□ 0.25
CDH4P55283 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.58■□□□□ 0.25
CDH4P55283 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH4P55283 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.58■□□□□ 0.25
CDH4P55283 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH4P55283 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH4P55283 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH4P55283 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.58■□□□□ 0.25
CDH4P55283 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH4P55283 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH4P55283 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH4P55283 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH4P55283 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH4P55283 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
CDH4P55283 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH4P55283 HAUS4P1-201ENST00000406739 1145 ntBASIC16.58■□□□□ 0.24
CDH4P55283 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH4P55283 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH4P55283 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH4P55283 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH4P55283 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CDH4P55283 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH4P55283 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH4P55283 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms