Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
BRPF1P55201 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRPF1P55201 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRPF1P55201 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.71■□□□□ 0.91
BRPF1P55201 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRPF1P55201 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
BRPF1P55201 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRPF1P55201 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRPF1P55201 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRPF1P55201 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRPF1P55201 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC20.7■□□□□ 0.9
BRPF1P55201 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRPF1P55201 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRPF1P55201 AP001282.1-201ENST00000531301 1499 ntBASIC20.7■□□□□ 0.9
BRPF1P55201 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRPF1P55201 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRPF1P55201 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRPF1P55201 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
BRPF1P55201 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRPF1P55201 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BRPF1P55201 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
BRPF1P55201 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRPF1P55201 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRPF1P55201 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BRPF1P55201 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
BRPF1P55201 AC005237.2-201ENST00000434368 219 ntBASIC20.7■□□□□ 0.9
BRPF1P55201 SPDYE14P-201ENST00000442619 822 ntBASIC20.7■□□□□ 0.9
BRPF1P55201 AC067863.1-201ENST00000494933 530 ntBASIC20.7■□□□□ 0.9
BRPF1P55201 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
BRPF1P55201 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRPF1P55201 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
BRPF1P55201 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BRPF1P55201 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
BRPF1P55201 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.7■□□□□ 0.9
BRPF1P55201 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRPF1P55201 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRPF1P55201 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRPF1P55201 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC20.7■□□□□ 0.9
BRPF1P55201 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRPF1P55201 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.7■□□□□ 0.9
BRPF1P55201 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRPF1P55201 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.7■□□□□ 0.9
BRPF1P55201 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BRPF1P55201 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
BRPF1P55201 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC20.69■□□□□ 0.9
BRPF1P55201 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRPF1P55201 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.69■□□□□ 0.9
BRPF1P55201 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRPF1P55201 AC011477.6-201ENST00000604980 1927 ntBASIC20.69■□□□□ 0.9
BRPF1P55201 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC20.69■□□□□ 0.9
BRPF1P55201 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
BRPF1P55201 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRPF1P55201 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.69■□□□□ 0.9
BRPF1P55201 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRPF1P55201 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRPF1P55201 AC236430.1-201ENST00000402231 743 ntBASIC20.69■□□□□ 0.9
BRPF1P55201 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.69■□□□□ 0.9
BRPF1P55201 EEF1DP4-201ENST00000446006 880 ntBASIC20.69■□□□□ 0.9
BRPF1P55201 OARD1-208ENST00000469104 704 ntTSL 2 BASIC20.69■□□□□ 0.9
BRPF1P55201 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.69■□□□□ 0.9
BRPF1P55201 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.69■□□□□ 0.9
BRPF1P55201 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.69■□□□□ 0.9
BRPF1P55201 PAM16-215ENST00000577031 548 ntTSL 4 BASIC20.69■□□□□ 0.9
BRPF1P55201 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.69■□□□□ 0.9
BRPF1P55201 AP001059.3-201ENST00000619053 235 ntBASIC20.69■□□□□ 0.9
BRPF1P55201 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC20.69■□□□□ 0.9
BRPF1P55201 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRPF1P55201 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.69■□□□□ 0.9
BRPF1P55201 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRPF1P55201 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRPF1P55201 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRPF1P55201 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRPF1P55201 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.69■□□□□ 0.9
BRPF1P55201 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
BRPF1P55201 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRPF1P55201 AL691432.1-201ENST00000596308 1422 ntBASIC20.69■□□□□ 0.9
BRPF1P55201 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRPF1P55201 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRPF1P55201 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BRPF1P55201 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BRPF1P55201 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BRPF1P55201 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRPF1P55201 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC20.68■□□□□ 0.9
BRPF1P55201 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BRPF1P55201 AC002472.2-201ENST00000442739 958 ntBASIC20.68■□□□□ 0.9
BRPF1P55201 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.68■□□□□ 0.9
BRPF1P55201 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.68■□□□□ 0.9
BRPF1P55201 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC20.68■□□□□ 0.9
BRPF1P55201 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.68■□□□□ 0.9
BRPF1P55201 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.68■□□□□ 0.9
BRPF1P55201 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
BRPF1P55201 BANF1P1-201ENST00000553684 263 ntBASIC20.68■□□□□ 0.9
BRPF1P55201 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRPF1P55201 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRPF1P55201 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BRPF1P55201 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
BRPF1P55201 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRPF1P55201 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC20.68■□□□□ 0.9
BRPF1P55201 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BRPF1P55201 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms