Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC22.89■■□□□ 1.26
CLTCL1P53675 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
CLTCL1P53675 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CLTCL1P53675 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CLTCL1P53675 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CLTCL1P53675 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
CLTCL1P53675 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CLTCL1P53675 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CLTCL1P53675 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CLTCL1P53675 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
CLTCL1P53675 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CLTCL1P53675 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CLTCL1P53675 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CLTCL1P53675 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC22.89■■□□□ 1.25
CLTCL1P53675 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CLTCL1P53675 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CLTCL1P53675 FTH1P14-201ENST00000482930 551 ntBASIC22.89■■□□□ 1.25
CLTCL1P53675 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC22.89■■□□□ 1.25
CLTCL1P53675 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
CLTCL1P53675 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CLTCL1P53675 CMC2-214ENST00000565925 640 ntTSL 5 BASIC22.89■■□□□ 1.25
CLTCL1P53675 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC22.89■■□□□ 1.25
CLTCL1P53675 PIGL-212ENST00000581006 554 ntTSL 4 BASIC22.89■■□□□ 1.25
CLTCL1P53675 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
CLTCL1P53675 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
CLTCL1P53675 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CLTCL1P53675 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CLTCL1P53675 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CLTCL1P53675 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC22.88■■□□□ 1.25
CLTCL1P53675 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC22.88■■□□□ 1.25
CLTCL1P53675 TP73-213ENST00000604479 1623 ntTSL 5 BASIC22.88■■□□□ 1.25
CLTCL1P53675 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CLTCL1P53675 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CLTCL1P53675 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CLTCL1P53675 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC22.88■■□□□ 1.25
CLTCL1P53675 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CLTCL1P53675 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CLTCL1P53675 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CLTCL1P53675 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC22.88■■□□□ 1.25
CLTCL1P53675 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC22.88■■□□□ 1.25
CLTCL1P53675 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC22.88■■□□□ 1.25
CLTCL1P53675 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
CLTCL1P53675 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC22.88■■□□□ 1.25
CLTCL1P53675 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC22.88■■□□□ 1.25
CLTCL1P53675 RPL28-206ENST00000558752 671 ntTSL 3 BASIC22.88■■□□□ 1.25
CLTCL1P53675 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC22.88■■□□□ 1.25
CLTCL1P53675 CLUHP6-201ENST00000580789 941 ntBASIC22.88■■□□□ 1.25
CLTCL1P53675 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC22.88■■□□□ 1.25
CLTCL1P53675 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CLTCL1P53675 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
CLTCL1P53675 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
CLTCL1P53675 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CLTCL1P53675 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC22.88■■□□□ 1.25
CLTCL1P53675 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC22.88■■□□□ 1.25
CLTCL1P53675 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CLTCL1P53675 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLTCL1P53675 OS9-205ENST00000413095 1660 ntTSL 2 BASIC22.87■■□□□ 1.25
CLTCL1P53675 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CLTCL1P53675 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLTCL1P53675 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CLTCL1P53675 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CLTCL1P53675 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC22.87■■□□□ 1.25
CLTCL1P53675 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CLTCL1P53675 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC22.87■■□□□ 1.25
CLTCL1P53675 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC22.87■■□□□ 1.25
CLTCL1P53675 MIR4525-201ENST00000580000 75 ntBASIC22.87■■□□□ 1.25
CLTCL1P53675 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC22.87■■□□□ 1.25
CLTCL1P53675 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC22.87■■□□□ 1.25
CLTCL1P53675 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLTCL1P53675 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CLTCL1P53675 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLTCL1P53675 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CLTCL1P53675 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CLTCL1P53675 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC22.87■■□□□ 1.25
CLTCL1P53675 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CLTCL1P53675 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CLTCL1P53675 LRRFIP1P1-201ENST00000498774 2246 ntBASIC22.87■■□□□ 1.25
CLTCL1P53675 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CLTCL1P53675 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC22.86■■□□□ 1.25
CLTCL1P53675 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CLTCL1P53675 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CLTCL1P53675 ACTG1P3-201ENST00000431775 1114 ntBASIC22.86■■□□□ 1.25
CLTCL1P53675 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CLTCL1P53675 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC22.86■■□□□ 1.25
CLTCL1P53675 KRT90P-201ENST00000549264 1064 ntBASIC22.86■■□□□ 1.25
CLTCL1P53675 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC22.86■■□□□ 1.25
CLTCL1P53675 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC22.86■■□□□ 1.25
CLTCL1P53675 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CLTCL1P53675 TECR-220ENST00000600083 1204 ntTSL 2 BASIC22.86■■□□□ 1.25
CLTCL1P53675 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC22.86■■□□□ 1.25
CLTCL1P53675 AC244669.2-201ENST00000612320 853 ntBASIC22.86■■□□□ 1.25
CLTCL1P53675 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC22.86■■□□□ 1.25
CLTCL1P53675 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CLTCL1P53675 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CLTCL1P53675 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC22.86■■□□□ 1.25
CLTCL1P53675 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CLTCL1P53675 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CLTCL1P53675 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CLTCL1P53675 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CLTCL1P53675 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms