Protein–RNA interactions for Protein: P49765

VEGFB, Vascular endothelial growth factor B, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFBP49765 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC18.34■□□□□ 0.53
VEGFBP49765 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VEGFBP49765 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VEGFBP49765 NOC2LP1-201ENST00000450578 752 ntBASIC18.34■□□□□ 0.53
VEGFBP49765 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.34■□□□□ 0.53
VEGFBP49765 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
VEGFBP49765 SLED1-202ENST00000512051 380 ntBASIC18.34■□□□□ 0.53
VEGFBP49765 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VEGFBP49765 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VEGFBP49765 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC18.34■□□□□ 0.53
VEGFBP49765 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
VEGFBP49765 ECM1P1-201ENST00000604092 1279 ntBASIC18.34■□□□□ 0.53
VEGFBP49765 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC18.34■□□□□ 0.53
VEGFBP49765 WT1-AS_6.1-201ENST00000614919 121 ntBASIC18.34■□□□□ 0.53
VEGFBP49765 AL136301.1-201ENST00000615830 422 ntBASIC18.34■□□□□ 0.53
VEGFBP49765 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VEGFBP49765 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VEGFBP49765 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
VEGFBP49765 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VEGFBP49765 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
VEGFBP49765 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VEGFBP49765 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
VEGFBP49765 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
VEGFBP49765 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
VEGFBP49765 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VEGFBP49765 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.33■□□□□ 0.53
VEGFBP49765 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.33■□□□□ 0.53
VEGFBP49765 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VEGFBP49765 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VEGFBP49765 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
VEGFBP49765 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.33■□□□□ 0.53
VEGFBP49765 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VEGFBP49765 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VEGFBP49765 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
VEGFBP49765 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VEGFBP49765 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VEGFBP49765 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
VEGFBP49765 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
VEGFBP49765 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VEGFBP49765 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VEGFBP49765 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VEGFBP49765 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VEGFBP49765 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VEGFBP49765 AC079178.1-201ENST00000420915 656 ntBASIC18.33■□□□□ 0.52
VEGFBP49765 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VEGFBP49765 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VEGFBP49765 AL161670.2-201ENST00000557650 1227 ntBASIC18.33■□□□□ 0.52
VEGFBP49765 CENPX-208ENST00000584347 799 ntTSL 2 BASIC18.33■□□□□ 0.52
VEGFBP49765 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC18.33■□□□□ 0.52
VEGFBP49765 AC244157.2-201ENST00000616239 1006 ntBASIC18.33■□□□□ 0.52
VEGFBP49765 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.33■□□□□ 0.52
VEGFBP49765 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.33■□□□□ 0.52
VEGFBP49765 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VEGFBP49765 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.33■□□□□ 0.52
VEGFBP49765 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
VEGFBP49765 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.33■□□□□ 0.52
VEGFBP49765 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VEGFBP49765 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VEGFBP49765 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VEGFBP49765 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.33■□□□□ 0.52
VEGFBP49765 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VEGFBP49765 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VEGFBP49765 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VEGFBP49765 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
VEGFBP49765 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.33■□□□□ 0.52
VEGFBP49765 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
VEGFBP49765 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VEGFBP49765 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VEGFBP49765 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VEGFBP49765 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VEGFBP49765 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.32■□□□□ 0.52
VEGFBP49765 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
VEGFBP49765 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VEGFBP49765 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.32■□□□□ 0.52
VEGFBP49765 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.32■□□□□ 0.52
VEGFBP49765 KRT8P35-201ENST00000483942 1338 ntBASIC18.32■□□□□ 0.52
VEGFBP49765 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VEGFBP49765 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VEGFBP49765 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VEGFBP49765 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VEGFBP49765 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VEGFBP49765 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VEGFBP49765 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.32■□□□□ 0.52
VEGFBP49765 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VEGFBP49765 AC097065.1-201ENST00000425737 517 ntBASIC18.32■□□□□ 0.52
VEGFBP49765 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.32■□□□□ 0.52
VEGFBP49765 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VEGFBP49765 CTBP2P4-201ENST00000513884 920 ntBASIC18.32■□□□□ 0.52
VEGFBP49765 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC18.32■□□□□ 0.52
VEGFBP49765 AC132192.2-201ENST00000596206 1147 ntBASIC18.32■□□□□ 0.52
VEGFBP49765 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC18.32■□□□□ 0.52
VEGFBP49765 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.32■□□□□ 0.52
VEGFBP49765 AC000095.1-201ENST00000603208 874 ntBASIC18.32■□□□□ 0.52
VEGFBP49765 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC18.32■□□□□ 0.52
VEGFBP49765 AC100757.4-201ENST00000626934 759 ntBASIC18.32■□□□□ 0.52
VEGFBP49765 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.32■□□□□ 0.52
VEGFBP49765 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.32■□□□□ 0.52
VEGFBP49765 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VEGFBP49765 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VEGFBP49765 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms