Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SRP9P49458 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SRP9P49458 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SRP9P49458 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SRP9P49458 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SRP9P49458 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SRP9P49458 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP9P49458 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP9P49458 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.54□□□□□ -0.08
SRP9P49458 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP9P49458 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SRP9P49458 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP9P49458 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.54□□□□□ -0.08
SRP9P49458 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP9P49458 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP9P49458 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP9P49458 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SRP9P49458 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP9P49458 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.54□□□□□ -0.08
SRP9P49458 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.54□□□□□ -0.08
SRP9P49458 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SRP9P49458 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
SRP9P49458 AC012640.2-201ENST00000561606 901 ntBASIC14.54□□□□□ -0.08
SRP9P49458 AC116407.3-201ENST00000623905 1129 ntBASIC14.54□□□□□ -0.08
SRP9P49458 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.54□□□□□ -0.08
SRP9P49458 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP9P49458 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
SRP9P49458 AP002414.3-201ENST00000589352 1468 ntBASIC14.54□□□□□ -0.08
SRP9P49458 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SRP9P49458 PI4KAP1-204ENST00000612579 1703 ntBASIC14.54□□□□□ -0.08
SRP9P49458 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP9P49458 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.54□□□□□ -0.08
SRP9P49458 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SRP9P49458 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP9P49458 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SRP9P49458 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP9P49458 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SRP9P49458 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SRP9P49458 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRP9P49458 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.53□□□□□ -0.08
SRP9P49458 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SRP9P49458 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.53□□□□□ -0.08
SRP9P49458 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP9P49458 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SRP9P49458 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SRP9P49458 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SRP9P49458 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP9P49458 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP9P49458 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP9P49458 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SRP9P49458 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SRP9P49458 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP9P49458 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SRP9P49458 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP9P49458 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP9P49458 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.53□□□□□ -0.08
SRP9P49458 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.53□□□□□ -0.08
SRP9P49458 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SRP9P49458 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP9P49458 RNA5SP419-201ENST00000515908 135 ntBASIC14.53□□□□□ -0.08
SRP9P49458 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.53□□□□□ -0.08
SRP9P49458 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.53□□□□□ -0.08
SRP9P49458 AL049840.3-201ENST00000602669 611 ntBASIC14.53□□□□□ -0.08
SRP9P49458 AC008667.4-201ENST00000607370 168 ntBASIC14.53□□□□□ -0.08
SRP9P49458 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SRP9P49458 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SRP9P49458 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP9P49458 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP9P49458 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP9P49458 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP9P49458 AL009178.2-201ENST00000597278 2719 ntBASIC14.53□□□□□ -0.08
SRP9P49458 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.53□□□□□ -0.08
SRP9P49458 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.53□□□□□ -0.08
SRP9P49458 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SRP9P49458 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP9P49458 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
SRP9P49458 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SRP9P49458 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SRP9P49458 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.53□□□□□ -0.08
SRP9P49458 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SRP9P49458 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.53□□□□□ -0.08
SRP9P49458 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SRP9P49458 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
SRP9P49458 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SRP9P49458 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SRP9P49458 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.52□□□□□ -0.08
SRP9P49458 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SRP9P49458 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SRP9P49458 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.52□□□□□ -0.08
SRP9P49458 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SRP9P49458 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.52□□□□□ -0.08
SRP9P49458 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SRP9P49458 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.52□□□□□ -0.08
SRP9P49458 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms