Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.11■□□□□ 0.33
MMP8P22894 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MMP8P22894 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
MMP8P22894 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP8P22894 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
MMP8P22894 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MMP8P22894 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
MMP8P22894 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP8P22894 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP8P22894 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP8P22894 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
MMP8P22894 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP8P22894 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.1■□□□□ 0.33
MMP8P22894 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
MMP8P22894 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP8P22894 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MMP8P22894 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.1■□□□□ 0.33
MMP8P22894 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP8P22894 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
MMP8P22894 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP8P22894 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP8P22894 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP8P22894 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP8P22894 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.1■□□□□ 0.33
MMP8P22894 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.1■□□□□ 0.33
MMP8P22894 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.1■□□□□ 0.33
MMP8P22894 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP8P22894 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP8P22894 CEND1P1-201ENST00000451006 455 ntBASIC17.1■□□□□ 0.33
MMP8P22894 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.1■□□□□ 0.33
MMP8P22894 IGHV3-62-201ENST00000520057 340 ntBASIC17.1■□□□□ 0.33
MMP8P22894 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.1■□□□□ 0.33
MMP8P22894 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.1■□□□□ 0.33
MMP8P22894 AC022145.2-201ENST00000598203 171 ntBASIC17.1■□□□□ 0.33
MMP8P22894 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.1■□□□□ 0.33
MMP8P22894 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.1■□□□□ 0.33
MMP8P22894 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP8P22894 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP8P22894 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP8P22894 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MMP8P22894 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP8P22894 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MMP8P22894 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MMP8P22894 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MMP8P22894 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.1■□□□□ 0.33
MMP8P22894 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MMP8P22894 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MMP8P22894 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.1■□□□□ 0.33
MMP8P22894 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP8P22894 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP8P22894 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MMP8P22894 AC132872.4-202ENST00000622924 2756 ntBASIC17.1■□□□□ 0.33
MMP8P22894 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
MMP8P22894 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP8P22894 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP8P22894 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MMP8P22894 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP8P22894 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.09■□□□□ 0.33
MMP8P22894 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MMP8P22894 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP8P22894 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
MMP8P22894 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP8P22894 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.09■□□□□ 0.33
MMP8P22894 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.09■□□□□ 0.33
MMP8P22894 CICP6-201ENST00000457191 2729 ntBASIC17.09■□□□□ 0.33
MMP8P22894 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
MMP8P22894 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.09■□□□□ 0.33
MMP8P22894 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP8P22894 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.09■□□□□ 0.33
MMP8P22894 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MMP8P22894 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP8P22894 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP8P22894 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.09■□□□□ 0.33
MMP8P22894 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.09■□□□□ 0.33
MMP8P22894 AL592309.1-201ENST00000443127 649 ntBASIC17.09■□□□□ 0.33
MMP8P22894 MIR4469-201ENST00000583919 79 ntBASIC17.09■□□□□ 0.33
MMP8P22894 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.09■□□□□ 0.33
MMP8P22894 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP8P22894 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MMP8P22894 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.09■□□□□ 0.33
MMP8P22894 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.09■□□□□ 0.33
MMP8P22894 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MMP8P22894 AL513210.1-201ENST00000629608 234 ntBASIC17.09■□□□□ 0.33
MMP8P22894 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.09■□□□□ 0.33
MMP8P22894 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.09■□□□□ 0.33
MMP8P22894 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.09■□□□□ 0.33
MMP8P22894 AP001282.1-201ENST00000531301 1499 ntBASIC17.09■□□□□ 0.33
MMP8P22894 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.09■□□□□ 0.33
MMP8P22894 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP8P22894 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MMP8P22894 AC011477.6-201ENST00000604980 1927 ntBASIC17.09■□□□□ 0.33
MMP8P22894 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
MMP8P22894 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
MMP8P22894 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.09■□□□□ 0.33
MMP8P22894 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MMP8P22894 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MMP8P22894 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP8P22894 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.08■□□□□ 0.33
MMP8P22894 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.08■□□□□ 0.33
MMP8P22894 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms