Protein–RNA interactions for Protein: P11586

MTHFD1, C-1-tetrahydrofolate synthase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1P11586 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MTHFD1P11586 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MTHFD1P11586 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MTHFD1P11586 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MTHFD1P11586 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.17■□□□□ 0.18
MTHFD1P11586 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.17■□□□□ 0.18
MTHFD1P11586 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.17■□□□□ 0.18
MTHFD1P11586 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.17■□□□□ 0.18
MTHFD1P11586 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.17■□□□□ 0.18
MTHFD1P11586 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 AL592309.1-201ENST00000443127 649 ntBASIC16.17■□□□□ 0.18
MTHFD1P11586 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 HLA-J-202ENST00000469281 1241 ntBASIC16.17■□□□□ 0.18
MTHFD1P11586 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.17■□□□□ 0.18
MTHFD1P11586 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.17■□□□□ 0.18
MTHFD1P11586 AC027612.4-201ENST00000605371 583 ntBASIC16.17■□□□□ 0.18
MTHFD1P11586 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.17■□□□□ 0.18
MTHFD1P11586 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
MTHFD1P11586 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.17■□□□□ 0.18
MTHFD1P11586 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.17■□□□□ 0.18
MTHFD1P11586 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 AC006538.1-201ENST00000567905 1585 ntBASIC16.17■□□□□ 0.18
MTHFD1P11586 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
MTHFD1P11586 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFD1P11586 TSPY26P-202ENST00000565928 3884 ntBASIC16.17■□□□□ 0.18
MTHFD1P11586 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.16■□□□□ 0.18
MTHFD1P11586 AL512652.2-201ENST00000625156 1716 ntBASIC16.16■□□□□ 0.18
MTHFD1P11586 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFD1P11586 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.16■□□□□ 0.18
MTHFD1P11586 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFD1P11586 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFD1P11586 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFD1P11586 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.16■□□□□ 0.18
MTHFD1P11586 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.16■□□□□ 0.18
MTHFD1P11586 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFD1P11586 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
MTHFD1P11586 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
MTHFD1P11586 MST1L-201ENST00000442552 2185 ntBASIC16.16■□□□□ 0.18
MTHFD1P11586 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFD1P11586 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFD1P11586 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MTHFD1P11586 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFD1P11586 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFD1P11586 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFD1P11586 SPCS2P4-201ENST00000436160 681 ntBASIC16.16■□□□□ 0.18
MTHFD1P11586 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.16■□□□□ 0.18
MTHFD1P11586 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.16■□□□□ 0.18
MTHFD1P11586 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.16■□□□□ 0.18
MTHFD1P11586 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
MTHFD1P11586 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFD1P11586 AC103702.1-201ENST00000548801 2630 ntBASIC16.16■□□□□ 0.18
MTHFD1P11586 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFD1P11586 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
MTHFD1P11586 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.16■□□□□ 0.18
MTHFD1P11586 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFD1P11586 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.16■□□□□ 0.18
MTHFD1P11586 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFD1P11586 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
MTHFD1P11586 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.16■□□□□ 0.18
MTHFD1P11586 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFD1P11586 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFD1P11586 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.15■□□□□ 0.18
MTHFD1P11586 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFD1P11586 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
MTHFD1P11586 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFD1P11586 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFD1P11586 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
MTHFD1P11586 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.15■□□□□ 0.18
MTHFD1P11586 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFD1P11586 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
MTHFD1P11586 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFD1P11586 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFD1P11586 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.15■□□□□ 0.18
MTHFD1P11586 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFD1P11586 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.15■□□□□ 0.18
MTHFD1P11586 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
MTHFD1P11586 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
MTHFD1P11586 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
MTHFD1P11586 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFD1P11586 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFD1P11586 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms