Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.17■□□□□ 0.5
RARBP10826 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.17■□□□□ 0.5
RARBP10826 MIR6775-201ENST00000617557 69 ntBASIC18.17■□□□□ 0.5
RARBP10826 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.17■□□□□ 0.5
RARBP10826 AC141586.5-201ENST00000624546 2050 ntBASIC18.17■□□□□ 0.5
RARBP10826 AL031731.1-201ENST00000642131 2094 ntBASIC18.17■□□□□ 0.5
RARBP10826 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARBP10826 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARBP10826 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARBP10826 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RARBP10826 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARBP10826 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.17■□□□□ 0.5
RARBP10826 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RARBP10826 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RARBP10826 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARBP10826 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARBP10826 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
RARBP10826 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.17■□□□□ 0.5
RARBP10826 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARBP10826 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RARBP10826 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RARBP10826 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RARBP10826 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
RARBP10826 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.17■□□□□ 0.5
RARBP10826 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RARBP10826 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RARBP10826 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.16■□□□□ 0.5
RARBP10826 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RARBP10826 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RARBP10826 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RARBP10826 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.16■□□□□ 0.5
RARBP10826 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RARBP10826 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.16■□□□□ 0.5
RARBP10826 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RARBP10826 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
RARBP10826 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RARBP10826 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RARBP10826 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.16■□□□□ 0.5
RARBP10826 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RARBP10826 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
RARBP10826 CLK3P2-201ENST00000427566 1453 ntBASIC18.16■□□□□ 0.5
RARBP10826 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RARBP10826 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RARBP10826 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
RARBP10826 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RARBP10826 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.16■□□□□ 0.5
RARBP10826 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.16■□□□□ 0.5
RARBP10826 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.16■□□□□ 0.5
RARBP10826 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.16■□□□□ 0.5
RARBP10826 RARRES2P5-201ENST00000564013 466 ntBASIC18.16■□□□□ 0.5
RARBP10826 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.16■□□□□ 0.5
RARBP10826 AC025048.3-201ENST00000590609 569 ntBASIC18.16■□□□□ 0.5
RARBP10826 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RARBP10826 AC005702.4-201ENST00000618393 416 ntBASIC18.16■□□□□ 0.5
RARBP10826 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RARBP10826 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.16■□□□□ 0.5
RARBP10826 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RARBP10826 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RARBP10826 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.16■□□□□ 0.5
RARBP10826 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RARBP10826 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RARBP10826 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RARBP10826 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARBP10826 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARBP10826 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARBP10826 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARBP10826 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RARBP10826 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARBP10826 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.15■□□□□ 0.5
RARBP10826 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.15■□□□□ 0.5
RARBP10826 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RARBP10826 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARBP10826 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARBP10826 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RARBP10826 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARBP10826 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARBP10826 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.15■□□□□ 0.5
RARBP10826 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RARBP10826 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.15■□□□□ 0.5
RARBP10826 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.15■□□□□ 0.5
RARBP10826 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.15■□□□□ 0.5
RARBP10826 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.15■□□□□ 0.5
RARBP10826 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.15■□□□□ 0.5
RARBP10826 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RARBP10826 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RARBP10826 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RARBP10826 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.15■□□□□ 0.5
RARBP10826 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.15■□□□□ 0.5
RARBP10826 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RARBP10826 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
RARBP10826 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.14■□□□□ 0.5
RARBP10826 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RARBP10826 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
RARBP10826 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
RARBP10826 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.14■□□□□ 0.49
RARBP10826 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RARBP10826 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RARBP10826 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RARBP10826 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RARBP10826 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms