Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ERBB2P04626 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.11■□□□□ 0.33
ERBB2P04626 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
ERBB2P04626 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERBB2P04626 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
ERBB2P04626 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERBB2P04626 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ERBB2P04626 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.1■□□□□ 0.33
ERBB2P04626 AC069224.1-201ENST00000566372 1715 ntBASIC17.1■□□□□ 0.33
ERBB2P04626 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ERBB2P04626 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERBB2P04626 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ERBB2P04626 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERBB2P04626 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERBB2P04626 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERBB2P04626 AL365203.3-201ENST00000609742 2057 ntBASIC17.1■□□□□ 0.33
ERBB2P04626 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
ERBB2P04626 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERBB2P04626 FAM220BP-201ENST00000377689 816 ntBASIC17.1■□□□□ 0.33
ERBB2P04626 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ERBB2P04626 KRT18P32-201ENST00000424695 1287 ntBASIC17.1■□□□□ 0.33
ERBB2P04626 GPS2P2-201ENST00000430745 888 ntBASIC17.1■□□□□ 0.33
ERBB2P04626 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.1■□□□□ 0.33
ERBB2P04626 LINC02447-202ENST00000501888 2146 ntBASIC17.1■□□□□ 0.33
ERBB2P04626 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.1■□□□□ 0.33
ERBB2P04626 RNA5SP410-201ENST00000516285 106 ntBASIC17.1■□□□□ 0.33
ERBB2P04626 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERBB2P04626 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.1■□□□□ 0.33
ERBB2P04626 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.1■□□□□ 0.33
ERBB2P04626 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ERBB2P04626 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERBB2P04626 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.1■□□□□ 0.33
ERBB2P04626 AC004835.2-201ENST00000603762 682 ntBASIC17.1■□□□□ 0.33
ERBB2P04626 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERBB2P04626 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERBB2P04626 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.1■□□□□ 0.33
ERBB2P04626 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.1■□□□□ 0.33
ERBB2P04626 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERBB2P04626 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERBB2P04626 AC008677.1-201ENST00000519230 1561 ntBASIC17.1■□□□□ 0.33
ERBB2P04626 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
ERBB2P04626 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.1■□□□□ 0.33
ERBB2P04626 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ERBB2P04626 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERBB2P04626 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.09■□□□□ 0.33
ERBB2P04626 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ERBB2P04626 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 AC008894.3-201ENST00000624324 3103 ntBASIC17.09■□□□□ 0.33
ERBB2P04626 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 CROCCP1-201ENST00000426910 5675 ntBASIC17.09■□□□□ 0.33
ERBB2P04626 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.09■□□□□ 0.33
ERBB2P04626 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 HLA-H-201ENST00000383620 1096 ntBASIC17.09■□□□□ 0.33
ERBB2P04626 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.09■□□□□ 0.33
ERBB2P04626 AC245100.5-201ENST00000452108 331 ntBASIC17.09■□□□□ 0.33
ERBB2P04626 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.09■□□□□ 0.33
ERBB2P04626 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.09■□□□□ 0.33
ERBB2P04626 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.09■□□□□ 0.33
ERBB2P04626 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
ERBB2P04626 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.09■□□□□ 0.33
ERBB2P04626 AL596442.2-201ENST00000610240 980 ntBASIC17.09■□□□□ 0.33
ERBB2P04626 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.09■□□□□ 0.33
ERBB2P04626 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 AP3S2-216ENST00000617003 1561 ntBASIC17.09■□□□□ 0.33
ERBB2P04626 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.09■□□□□ 0.33
ERBB2P04626 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ERBB2P04626 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.09■□□□□ 0.33
ERBB2P04626 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
ERBB2P04626 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
ERBB2P04626 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ERBB2P04626 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERBB2P04626 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERBB2P04626 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERBB2P04626 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERBB2P04626 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.08■□□□□ 0.33
ERBB2P04626 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ERBB2P04626 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.08■□□□□ 0.33
ERBB2P04626 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERBB2P04626 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERBB2P04626 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
ERBB2P04626 AC112504.1-201ENST00000623415 1841 ntBASIC17.08■□□□□ 0.33
ERBB2P04626 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ERBB2P04626 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms