Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LMNAP02545 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.11■□□□□ 0.33
LMNAP02545 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LMNAP02545 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.11■□□□□ 0.33
LMNAP02545 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMNAP02545 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMNAP02545 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LMNAP02545 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LMNAP02545 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
LMNAP02545 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LMNAP02545 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
LMNAP02545 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LMNAP02545 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
LMNAP02545 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.1■□□□□ 0.33
LMNAP02545 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.1■□□□□ 0.33
LMNAP02545 AC005915.1-201ENST00000624912 2018 ntBASIC17.1■□□□□ 0.33
LMNAP02545 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.1■□□□□ 0.33
LMNAP02545 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.1■□□□□ 0.33
LMNAP02545 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.1■□□□□ 0.33
LMNAP02545 SPDYE14P-201ENST00000442619 822 ntBASIC17.1■□□□□ 0.33
LMNAP02545 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.1■□□□□ 0.33
LMNAP02545 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.1■□□□□ 0.33
LMNAP02545 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.1■□□□□ 0.33
LMNAP02545 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.1■□□□□ 0.33
LMNAP02545 MIR6080-201ENST00000617359 66 ntBASIC17.1■□□□□ 0.33
LMNAP02545 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LMNAP02545 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.1■□□□□ 0.33
LMNAP02545 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.1■□□□□ 0.33
LMNAP02545 HYMAI-201ENST00000635591 3347 ntBASIC17.1■□□□□ 0.33
LMNAP02545 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 UXT-AS1-201ENST00000590504 1525 ntBASIC17.1■□□□□ 0.33
LMNAP02545 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.1■□□□□ 0.33
LMNAP02545 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LMNAP02545 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.1■□□□□ 0.33
LMNAP02545 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMNAP02545 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.09■□□□□ 0.33
LMNAP02545 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.09■□□□□ 0.33
LMNAP02545 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
LMNAP02545 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.09■□□□□ 0.33
LMNAP02545 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMNAP02545 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LMNAP02545 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMNAP02545 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.09■□□□□ 0.33
LMNAP02545 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMNAP02545 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMNAP02545 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LMNAP02545 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMNAP02545 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMNAP02545 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
LMNAP02545 SPCS2P4-201ENST00000436160 681 ntBASIC17.09■□□□□ 0.33
LMNAP02545 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.09■□□□□ 0.33
LMNAP02545 KRT8P23-201ENST00000560090 1207 ntBASIC17.09■□□□□ 0.33
LMNAP02545 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
LMNAP02545 AC109462.3-201ENST00000573934 613 ntBASIC17.09■□□□□ 0.33
LMNAP02545 STK25P1-201ENST00000585406 838 ntBASIC17.09■□□□□ 0.33
LMNAP02545 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMNAP02545 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMNAP02545 AC016396.2-201ENST00000562575 1417 ntBASIC17.09■□□□□ 0.33
LMNAP02545 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMNAP02545 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.09■□□□□ 0.33
LMNAP02545 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMNAP02545 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LMNAP02545 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMNAP02545 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.09■□□□□ 0.33
LMNAP02545 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMNAP02545 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
LMNAP02545 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LMNAP02545 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LMNAP02545 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.09■□□□□ 0.33
LMNAP02545 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
LMNAP02545 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.09■□□□□ 0.33
LMNAP02545 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LMNAP02545 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
LMNAP02545 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LMNAP02545 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LMNAP02545 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
LMNAP02545 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.08■□□□□ 0.33
LMNAP02545 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.08■□□□□ 0.33
LMNAP02545 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
LMNAP02545 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms