Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT6AP02538 IGLL3P-201ENST00000412472 434 ntBASIC15.86■□□□□ 0.13
KRT6AP02538 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.86■□□□□ 0.13
KRT6AP02538 HCG4B-203ENST00000450128 991 ntBASIC15.86■□□□□ 0.13
KRT6AP02538 RNA5SP415-201ENST00000517246 115 ntBASIC15.86■□□□□ 0.13
KRT6AP02538 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
KRT6AP02538 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
KRT6AP02538 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.86■□□□□ 0.13
KRT6AP02538 KRT126P-201ENST00000549467 1181 ntBASIC15.86■□□□□ 0.13
KRT6AP02538 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.86■□□□□ 0.13
KRT6AP02538 AC096734.2-201ENST00000562054 433 ntBASIC15.86■□□□□ 0.13
KRT6AP02538 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT6AP02538 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
KRT6AP02538 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.86■□□□□ 0.13
KRT6AP02538 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
KRT6AP02538 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
KRT6AP02538 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
KRT6AP02538 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT6AP02538 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT6AP02538 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT6AP02538 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT6AP02538 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.85■□□□□ 0.13
KRT6AP02538 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.85■□□□□ 0.13
KRT6AP02538 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT6AP02538 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT6AP02538 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT6AP02538 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT6AP02538 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT6AP02538 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT6AP02538 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT6AP02538 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT6AP02538 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT6AP02538 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT6AP02538 MRPL3P1-201ENST00000400109 1033 ntBASIC15.85■□□□□ 0.13
KRT6AP02538 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT6AP02538 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT6AP02538 AC007064.4-201ENST00000637740 555 ntBASIC15.85■□□□□ 0.13
KRT6AP02538 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT6AP02538 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
KRT6AP02538 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.85■□□□□ 0.13
KRT6AP02538 C8orf49-201ENST00000525043 1968 ntBASIC15.85■□□□□ 0.13
KRT6AP02538 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT6AP02538 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT6AP02538 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.85■□□□□ 0.13
KRT6AP02538 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT6AP02538 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT6AP02538 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
KRT6AP02538 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.85■□□□□ 0.13
KRT6AP02538 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KRT6AP02538 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT6AP02538 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT6AP02538 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT6AP02538 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KRT6AP02538 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.85■□□□□ 0.13
KRT6AP02538 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.85■□□□□ 0.13
KRT6AP02538 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6AP02538 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6AP02538 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
KRT6AP02538 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
KRT6AP02538 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
KRT6AP02538 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6AP02538 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
KRT6AP02538 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6AP02538 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
KRT6AP02538 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
KRT6AP02538 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6AP02538 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6AP02538 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
KRT6AP02538 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6AP02538 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6AP02538 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6AP02538 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6AP02538 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.84■□□□□ 0.13
KRT6AP02538 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.84■□□□□ 0.13
KRT6AP02538 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.84■□□□□ 0.13
KRT6AP02538 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.84■□□□□ 0.13
KRT6AP02538 IGHV3-22-201ENST00000520721 359 ntBASIC15.84■□□□□ 0.13
KRT6AP02538 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.84■□□□□ 0.13
KRT6AP02538 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.84■□□□□ 0.13
KRT6AP02538 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.84■□□□□ 0.13
KRT6AP02538 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6AP02538 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.84■□□□□ 0.13
KRT6AP02538 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.84■□□□□ 0.13
KRT6AP02538 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
KRT6AP02538 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6AP02538 AC010491.1-201ENST00000563101 2797 ntBASIC15.84■□□□□ 0.13
KRT6AP02538 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
KRT6AP02538 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6AP02538 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6AP02538 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6AP02538 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6AP02538 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6AP02538 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
KRT6AP02538 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRT6AP02538 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms