Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PDGFBP01127 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PDGFBP01127 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.17■□□□□ 0.18
PDGFBP01127 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFBP01127 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.17■□□□□ 0.18
PDGFBP01127 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.17■□□□□ 0.18
PDGFBP01127 KRT18P64-201ENST00000434946 1219 ntBASIC16.17■□□□□ 0.18
PDGFBP01127 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.17■□□□□ 0.18
PDGFBP01127 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.17■□□□□ 0.18
PDGFBP01127 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.17■□□□□ 0.18
PDGFBP01127 AC091804.1-201ENST00000486888 567 ntBASIC16.17■□□□□ 0.18
PDGFBP01127 IMP3P2-201ENST00000489760 475 ntBASIC16.17■□□□□ 0.18
PDGFBP01127 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.17■□□□□ 0.18
PDGFBP01127 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.17■□□□□ 0.18
PDGFBP01127 AC124947.2-201ENST00000547118 1133 ntBASIC16.17■□□□□ 0.18
PDGFBP01127 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.17■□□□□ 0.18
PDGFBP01127 AC104982.3-201ENST00000581995 514 ntBASIC16.17■□□□□ 0.18
PDGFBP01127 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.17■□□□□ 0.18
PDGFBP01127 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.17■□□□□ 0.18
PDGFBP01127 AC020914.3-201ENST00000594712 304 ntBASIC16.17■□□□□ 0.18
PDGFBP01127 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFBP01127 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFBP01127 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.17■□□□□ 0.18
PDGFBP01127 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFBP01127 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFBP01127 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.17■□□□□ 0.18
PDGFBP01127 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFBP01127 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFBP01127 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFBP01127 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PDGFBP01127 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFBP01127 AHCYP2-201ENST00000430630 1300 ntBASIC16.17■□□□□ 0.18
PDGFBP01127 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFBP01127 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDGFBP01127 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PDGFBP01127 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFBP01127 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PDGFBP01127 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFBP01127 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFBP01127 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.16■□□□□ 0.18
PDGFBP01127 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.16■□□□□ 0.18
PDGFBP01127 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFBP01127 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFBP01127 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.16■□□□□ 0.18
PDGFBP01127 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.16■□□□□ 0.18
PDGFBP01127 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFBP01127 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.16■□□□□ 0.18
PDGFBP01127 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PDGFBP01127 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
PDGFBP01127 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFBP01127 AL031731.1-201ENST00000642131 2094 ntBASIC16.16■□□□□ 0.18
PDGFBP01127 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFBP01127 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFBP01127 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFBP01127 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFBP01127 MIR33B-201ENST00000385104 96 ntBASIC16.16■□□□□ 0.18
PDGFBP01127 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFBP01127 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFBP01127 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.16■□□□□ 0.18
PDGFBP01127 AC004898.1-201ENST00000451057 766 ntBASIC16.16■□□□□ 0.18
PDGFBP01127 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.16■□□□□ 0.18
PDGFBP01127 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.16■□□□□ 0.18
PDGFBP01127 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.16■□□□□ 0.18
PDGFBP01127 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PDGFBP01127 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFBP01127 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFBP01127 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.16■□□□□ 0.18
PDGFBP01127 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.16■□□□□ 0.18
PDGFBP01127 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFBP01127 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFBP01127 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFBP01127 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
PDGFBP01127 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.16■□□□□ 0.18
PDGFBP01127 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.16■□□□□ 0.18
PDGFBP01127 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFBP01127 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.16■□□□□ 0.18
PDGFBP01127 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.16■□□□□ 0.18
PDGFBP01127 AC092978.1-202ENST00000637590 1327 ntBASIC16.16■□□□□ 0.18
PDGFBP01127 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.16■□□□□ 0.18
PDGFBP01127 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.16■□□□□ 0.18
PDGFBP01127 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PDGFBP01127 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDGFBP01127 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFBP01127 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PDGFBP01127 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFBP01127 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PDGFBP01127 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFBP01127 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFBP01127 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFBP01127 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFBP01127 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.15■□□□□ 0.18
PDGFBP01127 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFBP01127 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
PDGFBP01127 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.15■□□□□ 0.18
PDGFBP01127 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFBP01127 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFBP01127 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFBP01127 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFBP01127 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDGFBP01127 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms