Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
NKX2-2O95096 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
NKX2-2O95096 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
NKX2-2O95096 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NKX2-2O95096 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.02■□□□□ -0
NKX2-2O95096 UXT-AS1-201ENST00000590504 1525 ntBASIC15.02■□□□□ -0
NKX2-2O95096 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.02■□□□□ -0
NKX2-2O95096 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
NKX2-2O95096 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NKX2-2O95096 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.02■□□□□ -0
NKX2-2O95096 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NKX2-2O95096 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NKX2-2O95096 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NKX2-2O95096 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NKX2-2O95096 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.02■□□□□ -0
NKX2-2O95096 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NKX2-2O95096 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.02■□□□□ -0
NKX2-2O95096 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NKX2-2O95096 HLA-H-201ENST00000383620 1096 ntBASIC15.02■□□□□ -0
NKX2-2O95096 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.02■□□□□ -0
NKX2-2O95096 SLC25A39P2-201ENST00000537614 270 ntBASIC15.02■□□□□ -0
NKX2-2O95096 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.02■□□□□ -0
NKX2-2O95096 AC055717.3-201ENST00000622967 595 ntBASIC15.02■□□□□ -0
NKX2-2O95096 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.02■□□□□ -0
NKX2-2O95096 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.02□□□□□ -0.01
NKX2-2O95096 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NKX2-2O95096 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX2-2O95096 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.02□□□□□ -0.01
NKX2-2O95096 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
NKX2-2O95096 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX2-2O95096 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
NKX2-2O95096 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX2-2O95096 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.02□□□□□ -0.01
NKX2-2O95096 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX2-2O95096 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX2-2O95096 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NKX2-2O95096 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
NKX2-2O95096 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-2O95096 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-2O95096 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-2O95096 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-2O95096 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.01□□□□□ -0.01
NKX2-2O95096 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.01□□□□□ -0.01
NKX2-2O95096 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
NKX2-2O95096 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-2O95096 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.01□□□□□ -0.01
NKX2-2O95096 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NKX2-2O95096 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-2O95096 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-2O95096 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
NKX2-2O95096 AC004461.1-201ENST00000412461 403 ntBASIC15.01□□□□□ -0.01
NKX2-2O95096 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.01□□□□□ -0.01
NKX2-2O95096 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.01□□□□□ -0.01
NKX2-2O95096 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-2O95096 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.01□□□□□ -0.01
NKX2-2O95096 RNA5SP410-201ENST00000516285 106 ntBASIC15.01□□□□□ -0.01
NKX2-2O95096 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-2O95096 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.01□□□□□ -0.01
NKX2-2O95096 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-2O95096 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-2O95096 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.01□□□□□ -0.01
NKX2-2O95096 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-2O95096 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-2O95096 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-2O95096 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-2O95096 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
NKX2-2O95096 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NKX2-2O95096 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NKX2-2O95096 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.01□□□□□ -0.01
NKX2-2O95096 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-2O95096 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NKX2-2O95096 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-2O95096 AP001282.1-201ENST00000531301 1499 ntBASIC15.01□□□□□ -0.01
NKX2-2O95096 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NKX2-2O95096 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NKX2-2O95096 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-2O95096 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.01□□□□□ -0.01
NKX2-2O95096 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-2O95096 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
NKX2-2O95096 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15□□□□□ -0.01
NKX2-2O95096 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-2O95096 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15□□□□□ -0.01
NKX2-2O95096 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15□□□□□ -0.01
NKX2-2O95096 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX2-2O95096 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-2O95096 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NKX2-2O95096 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-2O95096 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15□□□□□ -0.01
NKX2-2O95096 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-2O95096 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-2O95096 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15□□□□□ -0.01
NKX2-2O95096 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15□□□□□ -0.01
NKX2-2O95096 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX2-2O95096 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15□□□□□ -0.01
NKX2-2O95096 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NKX2-2O95096 AP000344.2-201ENST00000512987 629 ntBASIC15□□□□□ -0.01
NKX2-2O95096 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15□□□□□ -0.01
NKX2-2O95096 AC092865.5-201ENST00000545435 363 ntBASIC15□□□□□ -0.01
NKX2-2O95096 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15□□□□□ -0.01
NKX2-2O95096 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms