Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.55□□□□□ -0.08
PFDN1O60925 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PFDN1O60925 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PFDN1O60925 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PFDN1O60925 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.55□□□□□ -0.08
PFDN1O60925 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
PFDN1O60925 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
PFDN1O60925 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PFDN1O60925 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.55□□□□□ -0.08
PFDN1O60925 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
PFDN1O60925 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.55□□□□□ -0.08
PFDN1O60925 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
PFDN1O60925 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PFDN1O60925 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PFDN1O60925 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PFDN1O60925 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PFDN1O60925 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
PFDN1O60925 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PFDN1O60925 AC069224.1-201ENST00000566372 1715 ntBASIC14.55□□□□□ -0.08
PFDN1O60925 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PFDN1O60925 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.55□□□□□ -0.08
PFDN1O60925 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.55□□□□□ -0.08
PFDN1O60925 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PFDN1O60925 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PFDN1O60925 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PFDN1O60925 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.54□□□□□ -0.08
PFDN1O60925 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
PFDN1O60925 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PFDN1O60925 AC131902.2-201ENST00000566892 2172 ntBASIC14.54□□□□□ -0.08
PFDN1O60925 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PFDN1O60925 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
PFDN1O60925 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PFDN1O60925 CYP2T1P-201ENST00000432607 1285 ntBASIC14.54□□□□□ -0.08
PFDN1O60925 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 PRSS44-201ENST00000515154 1146 ntBASIC14.54□□□□□ -0.08
PFDN1O60925 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.54□□□□□ -0.08
PFDN1O60925 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.54□□□□□ -0.08
PFDN1O60925 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.54□□□□□ -0.08
PFDN1O60925 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.54□□□□□ -0.08
PFDN1O60925 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.54□□□□□ -0.08
PFDN1O60925 AL031432.3-201ENST00000607698 485 ntBASIC14.54□□□□□ -0.08
PFDN1O60925 HLA-A-209ENST00000638375 975 ntBASIC14.54□□□□□ -0.08
PFDN1O60925 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.54□□□□□ -0.08
PFDN1O60925 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 AC008406.3-201ENST00000620001 1374 ntBASIC14.54□□□□□ -0.08
PFDN1O60925 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.54□□□□□ -0.08
PFDN1O60925 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.54□□□□□ -0.08
PFDN1O60925 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.54□□□□□ -0.08
PFDN1O60925 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.54□□□□□ -0.08
PFDN1O60925 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.54□□□□□ -0.08
PFDN1O60925 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.54□□□□□ -0.08
PFDN1O60925 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PFDN1O60925 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PFDN1O60925 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.53□□□□□ -0.08
PFDN1O60925 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PFDN1O60925 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PFDN1O60925 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.53□□□□□ -0.08
PFDN1O60925 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PFDN1O60925 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.53□□□□□ -0.08
PFDN1O60925 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.53□□□□□ -0.08
PFDN1O60925 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN1O60925 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PFDN1O60925 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms