Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.4■□□□□ 0.22
SMAD6O43541 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD6O43541 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD6O43541 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SMAD6O43541 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD6O43541 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SMAD6O43541 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD6O43541 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SMAD6O43541 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD6O43541 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD6O43541 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD6O43541 AC124067.4-201ENST00000519691 2379 ntBASIC16.4■□□□□ 0.22
SMAD6O43541 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.4■□□□□ 0.22
SMAD6O43541 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD6O43541 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD6O43541 MIR661-201ENST00000384842 89 ntBASIC16.4■□□□□ 0.22
SMAD6O43541 MRPS18AP1-201ENST00000414458 589 ntBASIC16.4■□□□□ 0.22
SMAD6O43541 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD6O43541 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.4■□□□□ 0.22
SMAD6O43541 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.4■□□□□ 0.22
SMAD6O43541 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.4■□□□□ 0.22
SMAD6O43541 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD6O43541 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.4■□□□□ 0.22
SMAD6O43541 AC092364.2-202ENST00000597012 1073 ntBASIC16.4■□□□□ 0.22
SMAD6O43541 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.4■□□□□ 0.22
SMAD6O43541 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD6O43541 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD6O43541 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD6O43541 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.4■□□□□ 0.22
SMAD6O43541 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.4■□□□□ 0.22
SMAD6O43541 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD6O43541 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD6O43541 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.4■□□□□ 0.22
SMAD6O43541 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SMAD6O43541 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SMAD6O43541 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
SMAD6O43541 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD6O43541 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD6O43541 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD6O43541 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMAD6O43541 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
SMAD6O43541 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
SMAD6O43541 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
SMAD6O43541 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD6O43541 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.39■□□□□ 0.21
SMAD6O43541 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD6O43541 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.39■□□□□ 0.21
SMAD6O43541 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD6O43541 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.39■□□□□ 0.21
SMAD6O43541 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.39■□□□□ 0.21
SMAD6O43541 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.39■□□□□ 0.21
SMAD6O43541 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD6O43541 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD6O43541 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD6O43541 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SMAD6O43541 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD6O43541 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SMAD6O43541 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.39■□□□□ 0.21
SMAD6O43541 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.39■□□□□ 0.21
SMAD6O43541 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SMAD6O43541 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.39■□□□□ 0.21
SMAD6O43541 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD6O43541 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.39■□□□□ 0.21
SMAD6O43541 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.39■□□□□ 0.21
SMAD6O43541 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.39■□□□□ 0.21
SMAD6O43541 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
SMAD6O43541 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD6O43541 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.39■□□□□ 0.21
SMAD6O43541 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.39■□□□□ 0.21
SMAD6O43541 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.39■□□□□ 0.21
SMAD6O43541 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD6O43541 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD6O43541 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD6O43541 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD6O43541 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.39■□□□□ 0.21
SMAD6O43541 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.39■□□□□ 0.21
SMAD6O43541 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.39■□□□□ 0.21
SMAD6O43541 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD6O43541 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD6O43541 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.39■□□□□ 0.21
SMAD6O43541 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD6O43541 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD6O43541 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD6O43541 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD6O43541 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.39■□□□□ 0.21
SMAD6O43541 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMAD6O43541 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SMAD6O43541 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SMAD6O43541 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD6O43541 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SMAD6O43541 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD6O43541 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.38■□□□□ 0.21
SMAD6O43541 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD6O43541 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD6O43541 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD6O43541 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SMAD6O43541 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.38■□□□□ 0.21
SMAD6O43541 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD6O43541 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMAD6O43541 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms