Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AC009336.1-201ENST00000608941 1553 ntBASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AC092338.2-201ENST00000568827 1415 ntBASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 KRT18P48-201ENST00000434763 852 ntBASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AC122714.2-201ENST00000502787 707 ntBASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 RN7SL471P-201ENST00000580476 299 ntBASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AC116562.4-202ENST00000641738 218 ntBASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 PCGF3-213ENST00000620529 1899 ntBASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AL671710.1-201ENST00000610245 2349 ntBASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 CICP14-201ENST00000629111 2732 ntBASIC10.35□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 API5-202ENST00000420461 2009 ntTSL 2 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
TMEM256-PLSCR3K7ERE1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms