Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 MIR149-201ENST00000384879 89 ntBASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 RPS2P52-201ENST00000469610 820 ntBASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 AC007322.4-201ENST00000509611 723 ntBASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 AC069236.1-201ENST00000604339 616 ntBASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 AC005181.1-201ENST00000604782 1256 ntBASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 COL11A1-202ENST00000358392 7327 ntAPPRIS ALT1 TSL 5 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 SACS-202ENST00000402364 15134 ntTSL 2 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 ABCA8-208ENST00000586539 5088 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 MAN2A2-201ENST00000360468 6268 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 SLC6A6P1-201ENST00000413933 1850 ntBASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 SLIT2-202ENST00000503823 5233 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 TMEM33-203ENST00000504986 7482 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
CHKB-CPT1BH3BT56 HARS-204ENST00000438307 1789 ntTSL 2 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 PLEKHA6-205ENST00000637508 5704 ntTSL 5 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 NRP1-206ENST00000374867 5877 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 KRT19P1-201ENST00000405746 1186 ntBASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 AL355472.2-201ENST00000422958 438 ntBASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 PNN-205ENST00000556530 601 ntTSL 2 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 AC011700.1-201ENST00000610409 2627 ntBASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 GRAMD4P4-201ENST00000613563 1115 ntBASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 LINC01101-201ENST00000622953 1884 ntBASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC9.01□□□□□ -0.97
CHKB-CPT1BH3BT56 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms