Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLCA1A8K7I4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.31■□□□□ 0.04
CLCA1A8K7I4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 AC112482.1-201ENST00000492080 688 ntBASIC15.31■□□□□ 0.04
CLCA1A8K7I4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 AC096734.2-201ENST00000562054 433 ntBASIC15.31■□□□□ 0.04
CLCA1A8K7I4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 MTDHP5-201ENST00000598980 586 ntBASIC15.31■□□□□ 0.04
CLCA1A8K7I4 AC092865.6-201ENST00000642101 219 ntBASIC15.31■□□□□ 0.04
CLCA1A8K7I4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCA1A8K7I4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 AC087163.2-201ENST00000457299 853 ntBASIC15.3■□□□□ 0.04
CLCA1A8K7I4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 AL513190.1-201ENST00000621254 727 ntBASIC15.3■□□□□ 0.04
CLCA1A8K7I4 AC022532.1-201ENST00000624563 1728 ntBASIC15.3■□□□□ 0.04
CLCA1A8K7I4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCA1A8K7I4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CLCA1A8K7I4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CLCA1A8K7I4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLCA1A8K7I4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CLCA1A8K7I4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA1A8K7I4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCA1A8K7I4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms