Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 AL031731.1-201ENST00000642131 2094 ntBASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.36□□□□□ -0.43
HLA-DRB4X5D2U9 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 HMGA1P7-201ENST00000406908 502 ntBASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 AC007967.2-201ENST00000432613 625 ntBASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 RNA5SP416-201ENST00000516838 111 ntBASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 AC106730.1-201ENST00000566722 1090 ntBASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 AL031055.1-201ENST00000606362 631 ntBASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 AC021097.1-201ENST00000607902 574 ntBASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 AC027601.4-201ENST00000611259 610 ntBASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 AL365209.1-201ENST00000624418 6473 ntBASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HLA-DRB4X5D2U9 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 GGT4P-201ENST00000623672 1708 ntBASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 GPAA1P2-202ENST00000606848 1787 ntBASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 PMS2P4-201ENST00000412466 1052 ntBASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 MED15P5-201ENST00000423150 992 ntBASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms