Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 POU5F1P6-201ENST00000466990 990 ntBASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.4□□□□□ -0.42
TRAPPC1Q9Y5R8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
TRAPPC1Q9Y5R8 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
TRAPPC1Q9Y5R8 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
TRAPPC1Q9Y5R8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 AL135999.2-201ENST00000622438 1686 ntBASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 PVRIG2P-201ENST00000435460 978 ntBASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAPPC1Q9Y5R8 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms